| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1463 |
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| Symbol | |
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| ID | 4920969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1685245 |
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| End bp | 1686084 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163017 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001093589 |
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| Protein GI | 127512392 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGCTA CAAGCGCGGT AGAGAAGATA GATTATTGGC AGGCGAGCAT CTTGAAAGAG
ATGGAGCTTA GCCGCGCGCA ATTTACCCAT TTCGCCTTCG AGAAACATGT GCATCTGGAC
TACCACATAG GCGTGGTCTG CCATGGCGGC CAACGCTATC ATCACAGGGG CAGCGAGTAC
CGCCTGACGC CGGGCAACAT ATCCACCCTC AATCCGGACG AGAGCCACAA CGGCCAGAGT
ATCGCCGATG GCGGCTATGA GGCGCTGGTG ATGTCTCTGC CCACCAGCTA TGTGCAGCAG
GTCGGCGGGG CGCTCAACCA GGGAGAGCTC TATTTCAGCA CGCCTATCCT AGACGACCCT
AAGCTGAGGG CCTATTTTAT CCGCCTGCAC AGGCAGCTGA CCCTGCATCA GGCCAACATC
ACGCCGCTGG AGGCGGAGAC CTTGCTGCTT GGTTTTATCA GCGAGCTGTT TTATCGCCAT
GGCAAGCTGC GTAACCTGCC GAGCTGTCAG GCCAGGTTAA GCGGTGCCCA GCTGGACAAT
ATCAAACAGC AGTTCCACCA AGGGCTGGAT CAGGAGTTCG AGCTGGAGCA GCTGGCGCTC
TCCGTCGACT TGAGTAAGTT TCAATTCTTG CGTCAATTCA AGGCGGCCAC CGGCATGACG
CCCCACGCCT ACCTGAAACG CCTGCGGCTG GAATATGCCA AGAAGGCGCT GATGCGGGGC
GACAGCGCCA TCAGCACCGC CTATGACTTA GGTTTCTTCG ATCAGAGCCA TTTCAATAAG
GCGTTCAAGC GGGCGTTTTT GATCACTCCA GCCCATTTTC AGAAACGGGT CACGCCCTGA
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| Protein sequence | MMATSAVEKI DYWQASILKE MELSRAQFTH FAFEKHVHLD YHIGVVCHGG QRYHHRGSEY
RLTPGNISTL NPDESHNGQS IADGGYEALV MSLPTSYVQQ VGGALNQGEL YFSTPILDDP
KLRAYFIRLH RQLTLHQANI TPLEAETLLL GFISELFYRH GKLRNLPSCQ ARLSGAQLDN
IKQQFHQGLD QEFELEQLAL SVDLSKFQFL RQFKAATGMT PHAYLKRLRL EYAKKALMRG
DSAISTAYDL GFFDQSHFNK AFKRAFLITP AHFQKRVTP
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