| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1437 |
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| Symbol | |
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| ID | 4924351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1651424 |
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| End bp | 1652968 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162976 |
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| Product | transcriptional regulator, TyrR |
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| Protein accession | YP_001093563 |
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| Protein GI | 127512366 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.555586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.67019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTAG AAGTAAGTTG CATCGACCGC GTGGGTCTAG CAAAAGACAT TCTGGTGATC
CTCGAAGGCT ATGGTATTAA CCTGATAGCT ATCGACGCCA GTAACCAGGG ATTTCTCTAT
CTGCAGTTTG CTGAGGTCAA CTTTGATGTG CTCAGTGAGC TGCTGCCGTT AATCAGGAAG
GTGGAAGGGG TGCATGATGT GCGCACAGTC TCTTTCATGC CTTCCGAGCA GGAGCATTAC
GCGCTCAAGA CCTTGTTGAA GACGCTGCCG GATTCTGTCT TCTCCATCGA CGTTAAGGGG
CGGATCCGCA TCGTCAATGA GTCGGCGCTG ATGACGGTCA ACATGGGTGA GCACGAGGTG
CTCGACGAAC CCCTCAATCA TTGGGTACAG GGCTTTAACT TCAACCGCTG GCTCAGCGAG
CCGCTGGTGT TGGCCCAGGC CACACGGGTT AACATTGGCC AGAGCGAATA CCTGGCCGAG
ATGCTGCCCA TCTATCTGCC TGACGAGAAC GACAAGACCA TTCTGGCCGG TGCCGTAGTC
TCCCTCAAAT CGCCCGCACG GGTCGGCAAG CAGTTTAACG CCCTACAGAA TCAGACCACA
GGATTTGAGA ATGTGCTGGC GGTCAGCGAC AAGATGAAAG AGGTGTTAGT GCAGGCCAGA
CGCATGGCCC AGCTCGATGC GCCTCTGCTG ATCACGGGTG AGACGGGCAC AGGCAAGGAG
CTGATGGCCA GAGCCTGCCA CGATGCTAGC ATGCGTCGTG AGCACCCCTT TATTGCGATT
AACTGCGCCG CCATGCCTGA CAGCGCCGCC GAAGAGGAGC TCTTCGGTTA TGTCAGCGGT
GGTGAAGTGG TCAAGCGCGG CTTCTTCGAG GAGGCCAAGG GCGGCACCGT CTTCTTAGAT
GAGATAGCGG AGATGTCCAA GGCGGCCCAG GTCAAACTGC TGCGCCTGCT GCAGGACGGC
ACCTTCCGCC GAGTAGGCGG CGATGTGGAG GTGCGCTCTG ACGTGCGCAT CATCTGCTCG
ACCCAGAAGA ACCTGGCCGA ACTATGTCAA ACCGGCGAGT TCCGCGAAGA TCTCTACTAT
CGCATCCATG TGCTCAGCTT CCATATGCCG TCGCTTCGCG AGCGCAAGGT GGATGTGATC
CCCCTGACCG AGATGTTCCT CGAGCATTAC AGTCAGCAGC TGTCTATCCC TATTCGTCGT
ATCTCGGCTC CATGCCGCGA GCATCTGCTG GGCTACGCCT GGCCGGGTAA CGTGCGCCAG
CTGAAAAACG CCATCTTCCG TGCGGTATCC ATGTGGGATG GCTCGGCGGA GCTGACGGTG
GATCAGCTCA AGCTACCGTC ATACGCCGAG GGCTTTGGCT ATTTCGATCA TCAGTTTGAG
GGCAGTCTGG ATCAGGCGAT GAAGCAGTTT GAGGCGAGTC TGCTCAGACG TCTCTATCCG
GCTTACCCCA GTACCCGCCA GCTGGCGAAG AAACTTGGGG TGTCTCACAC GGCTATCGCC
AACAAGCTGA GGGAATATAA GATCAGCAAG CAAAAAGGGA TGTAA
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| Protein sequence | MRLEVSCIDR VGLAKDILVI LEGYGINLIA IDASNQGFLY LQFAEVNFDV LSELLPLIRK
VEGVHDVRTV SFMPSEQEHY ALKTLLKTLP DSVFSIDVKG RIRIVNESAL MTVNMGEHEV
LDEPLNHWVQ GFNFNRWLSE PLVLAQATRV NIGQSEYLAE MLPIYLPDEN DKTILAGAVV
SLKSPARVGK QFNALQNQTT GFENVLAVSD KMKEVLVQAR RMAQLDAPLL ITGETGTGKE
LMARACHDAS MRREHPFIAI NCAAMPDSAA EEELFGYVSG GEVVKRGFFE EAKGGTVFLD
EIAEMSKAAQ VKLLRLLQDG TFRRVGGDVE VRSDVRIICS TQKNLAELCQ TGEFREDLYY
RIHVLSFHMP SLRERKVDVI PLTEMFLEHY SQQLSIPIRR ISAPCREHLL GYAWPGNVRQ
LKNAIFRAVS MWDGSAELTV DQLKLPSYAE GFGYFDHQFE GSLDQAMKQF EASLLRRLYP
AYPSTRQLAK KLGVSHTAIA NKLREYKISK QKGM
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