Gene Shew_1436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1436 
SymbolphhB 
ID4922058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1650852 
End bp1651190 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content52% 
IMG OID640162975 
Productpterin-4-alpha-carbinolamine dehydratase 
Protein accessionYP_001093562 
Protein GI127512365 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2154] Pterin-4a-carbinolamine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.171776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.595075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAT TAGCCCAAAT GAAATGCGAA GCCTGCCAGG CCGACGCGCC AAAGGTGACC 
GATGCCGAGT TGGCCGAGCT GATCCGCATG ATCCCAGATT GGGGTGTCGA GGTGCGTGAC
GGTATCATGC AGCTTGAGCG TGTCTACAAG TTTAAAAACT TTAAGCTGGC GATGGAATTT
ACCAATAAAT TGGCAGACTT AGCCGAGGAA GAGTTCCACC ATCCCGGTAT CCTAACCGAA
TGGGGCAAGG TCACCGTGAC CTGGTGGTCT CACTCGATCA AGGGCCTACA CCGCAACGAT
TTCATCATGG CGGCCAAGAC AGACCAGTTA TTGGACTAA
 
Protein sequence
MTELAQMKCE ACQADAPKVT DAELAELIRM IPDWGVEVRD GIMQLERVYK FKNFKLAMEF 
TNKLADLAEE EFHHPGILTE WGKVTVTWWS HSIKGLHRND FIMAAKTDQL LD