Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1435 |
Symbol | phhA |
ID | 4921874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1649972 |
End bp | 1650805 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640162974 |
Product | phenylalanine 4-monooxygenase |
Protein accession | YP_001093561 |
Protein GI | 127512364 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3186] Phenylalanine-4-hydroxylase |
TIGRFAM ID | [TIGR01267] phenylalanine-4-hydroxylase, monomeric form |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0156707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.62095 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGGCAG GAGCAGTCAT TTGTGTTGTA TTTATCATGA GTAAACAAAC TACGTATCAG GCCAGACTGC CTGATAGCCA AGGGGTCATC CAATACCCTG ACAATGAACA CGAGATCTGG CAAGCGCTGT ACGACAGACA GAAGGGTAAT TTGCCCCACT ATGCCTGTGA TGCTTATCTG AAAGGGCTCG AAGATCTTGC CTTGCCTGCA GATCGCATCC CGCAGCTTGG CGAAATAGAC GCTGTGCTGC AACAGGCCAC TGGGTGGAAG ACGGCCGCCG TGCCGGCGCT GATCTCGTTT GAGAAGTTTT TCCAGCTGCT GGCGAACCAG GAGTTTCCGG TCGCCACCTT TATCCGCAGC AAGGAGGAGT TCGACTACCT GCAGGAGCCC GATATCTTTC ACGAGATCTT CGGTCACTGC CCGCTGTTGA CCAATCCTTC ATTTGCCCGT TTCTCTCACG AATACGGTAA GTTGGGTCTG GCCGCCTCCA AAGAGGAGCG TGTCTTTCTC GCCAGACTTT ACTGGTTTAC CGTGGAGTTT GGTTTGATCC GTCAGACCAA CGATGAGCTG AAGATCTACG GCGGCGGCAT ATTGAGTTCG CCCGGTGAGA CGCTATACGC CATGAGCGAT ACTCCAGTGG TGAAGCCTTT CGATCTGTTG GATATTTTAA GAACCCCTTA TCGAATCGAT ATCATGCAGC CAATTTATTA CGCTATTGAT TCAATTGATT ACTTAGACGA AATCGTCAAA ATGGACATCA TGGGCGCCGT GACTAAGGCG CGTCAGCTAG GCCTACATGC CCCCATGTTT GAGCCAAAAT CGAAAGCCAG TTAA
|
Protein sequence | MEAGAVICVV FIMSKQTTYQ ARLPDSQGVI QYPDNEHEIW QALYDRQKGN LPHYACDAYL KGLEDLALPA DRIPQLGEID AVLQQATGWK TAAVPALISF EKFFQLLANQ EFPVATFIRS KEEFDYLQEP DIFHEIFGHC PLLTNPSFAR FSHEYGKLGL AASKEERVFL ARLYWFTVEF GLIRQTNDEL KIYGGGILSS PGETLYAMSD TPVVKPFDLL DILRTPYRID IMQPIYYAID SIDYLDEIVK MDIMGAVTKA RQLGLHAPMF EPKSKAS
|
| |