| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1433 |
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| Symbol | |
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| ID | 4921273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1647620 |
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| End bp | 1648633 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162972 |
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| Product | UDP-glucose 4-epimerase |
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| Protein accession | YP_001093559 |
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| Protein GI | 127512362 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1087] UDP-glucose 4-epimerase |
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| TIGRFAM ID | [TIGR01179] UDP-glucose-4-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0122713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.432402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATTT TAGTCACAGG TGGCGCAGGC TACATAGGTA GCCACACTGT CGTTGAGCTA
CTTAATGATG ATCAACAGGT AGTGATCATA GACAATCTGA GTAACTCAAG CGTCGAGGCC
CTCAAGCGGG TCGAGCAGAT CACCAATAAA GGGGTCACCT TCTACCAGGG CGACGTGCTC
AACAAGGCCT TCCTGCAGAA GGTCTTTACC GACCATGATA TCGACGCCGT GATCCATTTT
GCCGGCCTCA AGGCGGTCGG CGAGTCGGTC GCCCAGCCGC TGCGCTACTA TGAAAACAAC
GTCACCGGCA CCTTAGTGCT GTGCGAGGTG ATGGCCGAAT TTAATGTGAA GAACCTGGTA
TTTAGCTCAT CGGCTACCGT CTATGGCGAT CCCGCCTCAC TGCCCATTAC CGAAGATTTC
CCCACGGGCG CCACTAACCC CTATGGTCAG TCTAAGCTGA TGGTCGAGCA TATCCTTAAG
GATCTACACC ACTCGGACTC GAGCTGGAAC ATCGCCAGGC TGCGTTACTT CAACCCTGTT
GGCGCCCACG AGAGCGGCCT CATCGGCGAA GATCCCAACG ATATCCCCAA TAACCTGATG
CCCTTCATCG CCCAGGTTGC CGTGGGTCAA CGCGAGAAGC TGAGCGTCTT CGGCGACGAC
TACGACACCC ATGATGGCAC AGGGGTGCGC GACTATATCC ATGTGGTGGA TCTGGCTAAG
GGCCACCTGA AGGCGCTTGC GAAACTCAAC ACCCAGCCAG GCTTAGTCAC CTATAATCTG
GGCACAGGCC AGGGCTATAG CGTGCTGGAC ATGGTCAAGG CATTCGAGAA GGCCTGCGGG
CATGCCATCG CCTACCAGAT CGCGCCGCGT CGTCCTGGCG ATATCGCCGC CTGTTACGCC
GATCCTCACA AGGCGCAGAC AGAGCTGAAC TGGCAGGCCA CCCACACCAT AGAAGATATG
GCCAACAGCA GCTGGCACTG GCAGTCCTCT AACCCGAGCG GCTACAAGGC CTAA
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| Protein sequence | MTILVTGGAG YIGSHTVVEL LNDDQQVVII DNLSNSSVEA LKRVEQITNK GVTFYQGDVL
NKAFLQKVFT DHDIDAVIHF AGLKAVGESV AQPLRYYENN VTGTLVLCEV MAEFNVKNLV
FSSSATVYGD PASLPITEDF PTGATNPYGQ SKLMVEHILK DLHHSDSSWN IARLRYFNPV
GAHESGLIGE DPNDIPNNLM PFIAQVAVGQ REKLSVFGDD YDTHDGTGVR DYIHVVDLAK
GHLKALAKLN TQPGLVTYNL GTGQGYSVLD MVKAFEKACG HAIAYQIAPR RPGDIAACYA
DPHKAQTELN WQATHTIEDM ANSSWHWQSS NPSGYKA
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