| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1417 |
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| Symbol | |
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| ID | 4921488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1630900 |
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| End bp | 1631943 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640162957 |
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| Product | undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase |
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| Protein accession | YP_001093544 |
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| Protein GI | 127512347 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
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| TIGRFAM ID | [TIGR02380] undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0067486 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAATACT TTATACCGTT TGTTACGGTG TTTTGCTTAA CGTGTGTGGC AATTAAATTG
TTTCATCCAA TTGCAGAGAA AGTGGGCTTA GTAGATCTAC CTAATGAAAG GAAAACACAT
GTTGGTGCAA TACCGTTAAT CGGTGGCGTG GCAATATATT GTAGTGTTTT GCTTGTTTCC
AGCATTGTGT TTGAACAAAA TCAGGTGTTC AATCTTTACT TGATTTCTGC TGCGCTCATA
TTGTTTTTGG GGGTGTTGGA CGACAAATAT GATTTGTCTG TTCGAGTGAG GATTGTTGCG
CAAGTGATCA CCGCTTCAAT TCTTGTCTTT GGTGCAGGAT TTTACCTTAC TTCATTAGGC
CATATTACTT ATTTCTTTGA GTTGAAGCTT GGCTACGTAG GTGTTTTTGT CACCATATTG
GCAGTTATCG GTGCCATTAA TGCCTTCAAT ATGGTGGATG GCATTGATGG CTTAGCCGGT
ATGTTGAGCC TAGTCACTTT TACCTCTTTG GCACTGCTGT TTTACACGGC CGGTAATCAT
TGGTTTATTC TTCCACTACT TTTCATTGGC GCAATAATTG GGTACTTGAT ATTTAATTTA
AGATGGCCTT TTGAAACCGT TCAAAAAATT TTTATGGGCG ATGCGGGGAG TATGCTGATT
GGGTTGACGG TTGTATGGTT ACTCGTGTTG GGTGTTGAAG CTGATGCTCG GGTATTTGCA
CCCGTTACCG CACTGTATCT GATTGGTATT CCGTTGATGG ATATGGCGGC CATCATGTAC
CGTCGTGTCA AAAAAGGGAT GTCTCCTTTT AAGCCTGACC GAGATCACCT TCACCACATA
TTTGAAAGAG CGGGCTATAG TCGAAAACAA ACCCTGGTTC GGATTTCACT GGCTTCCATA
GTACTCGCTG CACTCGGGGT TTCGGGAGAA TGGATGCTAG TGCCTGAGTG GATTATGTTT
TTGGGCTTTG TTGCTATTTT TGTGGCCTAT AACTGGGCAT TATCACACAT TTGGCAAATA
TTGACTTGGC TTCGTAAAGC TTAG
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| Protein sequence | MEYFIPFVTV FCLTCVAIKL FHPIAEKVGL VDLPNERKTH VGAIPLIGGV AIYCSVLLVS
SIVFEQNQVF NLYLISAALI LFLGVLDDKY DLSVRVRIVA QVITASILVF GAGFYLTSLG
HITYFFELKL GYVGVFVTIL AVIGAINAFN MVDGIDGLAG MLSLVTFTSL ALLFYTAGNH
WFILPLLFIG AIIGYLIFNL RWPFETVQKI FMGDAGSMLI GLTVVWLLVL GVEADARVFA
PVTALYLIGI PLMDMAAIMY RRVKKGMSPF KPDRDHLHHI FERAGYSRKQ TLVRISLASI
VLAALGVSGE WMLVPEWIMF LGFVAIFVAY NWALSHIWQI LTWLRKA
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