| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1412 |
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| Symbol | |
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| ID | 4923466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1625289 |
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| End bp | 1626407 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640162953 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_001093540 |
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| Protein GI | 127512343 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0237532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGATG GCGCCGAATT TAAAGTTTAT ACACAGAGAT TTATAATGGA AAAAATAGCA
TATTATCTTG GCCAATATCA TTCATTAGAG GAAAATAATG CATTTTGGGG GGAAGGGTTT
ACTGAATGGC ATAATGTTGC TAAGGCTAGG CCTTTGTTCC CATCACATAG GCAGCCAGTT
TTACCAGGTA AACTAGGATT CTATGATTTA CGAAATAATG ATACAATTGA AGAACAGGTA
GCCTTAGCTG ATAGTTTTGG AGTTACAGCT TTCTGTCACT GGCACTATTG GTTTGGCGGG
AAACGAGTAT TGTATAGGCC ATTCGATTCT ATGCTAAAAA TTCAAAATTC ACCTGTAAAG
GTAATGTTGG GTTGGGCAAA TGAATCTTGG ACAGGCATTT GGCATGGGCT TTCAGATCAA
GTGATTTTTG AGCAACCCTA TAATAAAATT GAGTTGAACG AACATGCTAA GCTGCTAGCA
GATTATTTTC GACATGAGAA CTACTTGAAG GTTAACGGTA AGGCTGCTTT TCTAATATAC
AAGCCTAGAA AAATACCTGA AAGCAAGAGC TATTTGCAAC TTCTTCGACA GAAAGTATAT
GAAAACTGTG GCCTTGATAT GTATATAATT GGCACTTGGG GACCTGGCCG GTTGGAAGTA
ATTCATAGTG CAGATGAATT AGGCTTGGAT GCATTAGTTG CTAATAATGT TGGAGCAACG
TTTAAATCTG AATTATCAAG AAAGTTATAT AATGGTTTTT GGACTGCAGC CAAATCATTA
GGTCTTGGCC CAGAGTTAAG AAATTATGCA TCGACAGTTA AAACTTTAGA GTACGCTCAC
CAAAATATTT CTGGCACCGT TCACTCTACT ATTGTTACTG GATGGGATAA TAGCCCAAGA
TCAAATCGCC GAGCATTGGT TTTGACTAAC TTTAACGAAA ATTCATTTAA ATATGCAATC
GATATAGCGA TTTCTAATGA GAAAAATAAT GAAAATAAGT TATTATTTAT TAAATCTTGG
AATGAATGGG CAGAAGGGAA CACTTTAGAA CCTCGCTTTA AAGAAGACTG GAGTTTAGGA
AAGGTTCTCA AAAAACAGAT CATTAAGCAT GATGTATAG
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| Protein sequence | MADGAEFKVY TQRFIMEKIA YYLGQYHSLE ENNAFWGEGF TEWHNVAKAR PLFPSHRQPV
LPGKLGFYDL RNNDTIEEQV ALADSFGVTA FCHWHYWFGG KRVLYRPFDS MLKIQNSPVK
VMLGWANESW TGIWHGLSDQ VIFEQPYNKI ELNEHAKLLA DYFRHENYLK VNGKAAFLIY
KPRKIPESKS YLQLLRQKVY ENCGLDMYII GTWGPGRLEV IHSADELGLD ALVANNVGAT
FKSELSRKLY NGFWTAAKSL GLGPELRNYA STVKTLEYAH QNISGTVHST IVTGWDNSPR
SNRRALVLTN FNENSFKYAI DIAISNEKNN ENKLLFIKSW NEWAEGNTLE PRFKEDWSLG
KVLKKQIIKH DV
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