| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1401 |
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| Symbol | |
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| ID | 4923540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1613792 |
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| End bp | 1614889 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640162942 |
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| Product | dTDP-glucose 4,6 dehydratase |
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| Protein accession | YP_001093529 |
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| Protein GI | 127512332 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
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| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0069994 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGATTC TAGTCACAGG TGGAGCCGGA TTTATCGGCT CTGCGGTCGT TCGTCATATT
ATCAACAATA CACAAGATAG TGTAATTAAT GTCGACAAGT TAACTTACGC TGGCAATCTT
GAGTCACTCG TGAGCGTAGA TAAAGATGAA AGATACGCTT TTGAGCAAGT TGATATCTGT
GATCGAGCAG AATTAGATAG GGTCTTTAAT GAACACAAGC CTGATGCGGT AATGCACCTG
GCTGCAGAGT CTCATGTTGA TCGTTCAATT ACAGGTCCCG CTGACTTTAT TCAAACCAAC
ATCGTTGGTA CTTATACCCT TCTTGAAGCG ACTCGCGCAT ATTGGAATGA ACTACCTGCT
GATAAAAAGA CAGCCTTTCG TTTTCATCAT ATTTCTACCG ATGAGGTTTA TGGTGACTTA
CTTCATCCTG ATGAAGTACA AAATCCAGAC GAGTTACCCT TATTCACTGA AACCACTCCT
TATGCCCCGA GTAGTCCGTA TTCGGCATCG AAAGCATCTA GTGATCACCT TGTTCGCGCT
TGGTTACGCA CCTATGGTTT GCCAACAATT GTGACCAATT GCTCAAATAA CTATGGTCCT
TACCACTTTC CCGAAAAACT TATTCCTCTT GTGATTTTGA ATGCATTGGA AGGCAAGTCT
TTGCCTGTTT ACGGCAAAGG TGACCAAATT CGTGATTGGT TATATGTAGA AGATCATGCT
CGTGCGCTAT ATAAGGTGGT TACTGAAGGT GTTATTGGGG AAACCTATAA CATTGGCGGT
CACAATGAAA AGCAAAATTT GGAAGTCGTA AAAACCATCT GTTCTATTTT AGATGAGCTA
ATGCCTAAGG ATGTTCCTTA CTCAGAACAA ATTACTTATG TAACAGATCG TCCAGGTCAT
GATCGTCGCT ATGCCATAGA TTCAAGCAAA ATGAGTCAAG AGCTGAACTG GTTGCCTGAA
GAGACCTTTG AAACAGGGCT TCGGAAAACG GTACAGTGGT ATCTTGATAA CCAGGTTTGG
AGTCAACGTG TGCAAGATGG TTCTTATCAA AGAGAACGTT TAGGTGTGAT TAGTAACACT
CAGGAAGGTG ATAAATAA
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| Protein sequence | MKILVTGGAG FIGSAVVRHI INNTQDSVIN VDKLTYAGNL ESLVSVDKDE RYAFEQVDIC
DRAELDRVFN EHKPDAVMHL AAESHVDRSI TGPADFIQTN IVGTYTLLEA TRAYWNELPA
DKKTAFRFHH ISTDEVYGDL LHPDEVQNPD ELPLFTETTP YAPSSPYSAS KASSDHLVRA
WLRTYGLPTI VTNCSNNYGP YHFPEKLIPL VILNALEGKS LPVYGKGDQI RDWLYVEDHA
RALYKVVTEG VIGETYNIGG HNEKQNLEVV KTICSILDEL MPKDVPYSEQ ITYVTDRPGH
DRRYAIDSSK MSQELNWLPE ETFETGLRKT VQWYLDNQVW SQRVQDGSYQ RERLGVISNT
QEGDK
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