Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1393 |
Symbol | |
ID | 4922014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1601587 |
End bp | 1601943 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640162934 |
Product | FlhB domain-containing protein |
Protein accession | YP_001093521 |
Protein GI | 127512324 |
COG category | [S] Function unknown |
COG ID | [COG2257] Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.372355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.17507 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGAACA CATACGACAA TAAACCAGAT GACTTACAAG GTGGTTCAGA CAACAAACCA CGCAGGCCCA CTCAAGCTGC GGCGCTGCGC TATGACGGAA AGTTGGCCCC GCAAATCACA GCCAAGGGGG AGGATTTAGT CGCCGAGGAG ATCATCGCCA TCGCCAAGGA GGCTGGCATC TATATCCATC AAGATGCCAA CTTGAGTAAC TTTCTTCAAA AACTCGAGAT AGGTGAAGAG ATCCCCAAGG AGCTATATCT GCTCATCGCC GAACTGATCG CCTTCGTCTA TATGCTGGAC GGCAAGTTCC CTGAGCGTTG GGACAATATG CACAAAAGGA TCATGCAAGA GGTGTAG
|
Protein sequence | MMNTYDNKPD DLQGGSDNKP RRPTQAAALR YDGKLAPQIT AKGEDLVAEE IIAIAKEAGI YIHQDANLSN FLQKLEIGEE IPKELYLLIA ELIAFVYMLD GKFPERWDNM HKRIMQEV
|
| |