| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1390 |
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| Symbol | |
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| ID | 4922798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1599526 |
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| End bp | 1600515 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640162931 |
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| Product | CheW protein |
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| Protein accession | YP_001093518 |
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| Protein GI | 127512321 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.180967 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAACT CGGTTGACGA AGCGGTCTTT AATTATTTTT CCTTGCTGCT CTCCGAGCCC
GGTGAAGAGA GCGTCACGGC CGACAAGCCT GAAGTAAAGG GCGAGCAGGC GATAGCACAA
AATGGTCAAA TGAGAGGCCC TGCACCTGCA GTAAAACGTC AGCCTCTTAC CGAACAGTCT
AAACCGCGCC CGGTGGTCAC TCAGGCTACG CCGACACCAC TCAATAAGCT CGCGCTCGAG
CAATTGCTGG CGCCGGTGAG TGAGATTGCT ACTCAGACAG AGACTCAAAC AGCAAGCAAG
GTCGAGCTCA AAACGCTCGA TACCAAACCT GCTAGCGTCG AAACGATGAC ACAAGCTGTA
TCGGTTCAAA CGAAATCTGA GTCGCAAGTT AAGCAAAAAA TCGAAGAAAA ATTAGAAACT
TCGGCTAGTA TTAAGCAAGA GGAAATTGTA ACCGAAAAGG TCGATCTGGC CGCGGCACCA
CAGACGCAAA CTGGCGCGAC ACCACCAGGG GTGACAGAGG CGCTAGTCGA GCAGCTCGAC
GATGAGTTTC AGGTGCTATT TTTCAAGGTG GCGGGTCTCA CGTTGGCCGT GCCCTTGGTG
AGCCTTGGCG GAATTGTTAA GGTGGAGCGG ATCAATCACA TTATGGGGCG ACCGGCCTGG
TATCTTGGGG TTCAGACCCA CAGGGATTCG CAACTCAATA TTGTCGATTC GGGTGCCTGG
GTGATGCCGG AAAAATATGA TGATAAACTG GCGCAATCCG TTGATTACCA ATATATTGTA
CTCTTAGAGG ACAGTAATTG GGGGCTGGCC TGTGAGTCGC TGGTGAATTC CGTCAGAATT
TTAAAGTCAG AAGTTAATTG GCGTACCAAA GCGGGTAAAC GCCCTTGGCT GGCTGGCGTC
GTAAAAGAAC AGATGTGCGG CATTCTACAT GTGCAGGCAC TGATTGAATT ATTAAATTTG
GGTTTAGGTA GTCAGGACTC TATTGGCTGA
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| Protein sequence | MSNSVDEAVF NYFSLLLSEP GEESVTADKP EVKGEQAIAQ NGQMRGPAPA VKRQPLTEQS
KPRPVVTQAT PTPLNKLALE QLLAPVSEIA TQTETQTASK VELKTLDTKP ASVETMTQAV
SVQTKSESQV KQKIEEKLET SASIKQEEIV TEKVDLAAAP QTQTGATPPG VTEALVEQLD
DEFQVLFFKV AGLTLAVPLV SLGGIVKVER INHIMGRPAW YLGVQTHRDS QLNIVDSGAW
VMPEKYDDKL AQSVDYQYIV LLEDSNWGLA CESLVNSVRI LKSEVNWRTK AGKRPWLAGV
VKEQMCGILH VQALIELLNL GLGSQDSIG
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