| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1382 |
|---|
| Symbol | |
|---|
| ID | 4922435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 1591829 |
|---|
| End bp | 1592740 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640162923 |
|---|
| Product | cobyrinic acid a,c-diamide synthase |
|---|
| Protein accession | YP_001093510 |
|---|
| Protein GI | 127512313 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0455] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0481328 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.271207 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGGC CTACGCATTT GAGTAATATA ATGAGTCGGG ATCAAGCAAG CGGTTTACGT
ATGATGAATC AACCATATAA CGAAAAAGTA AAAGTAATTG CCGTAACCGG TGGTAAGGGT
GGCGTAGGTA AAACCAGCGT GTCGATCAAT ACCGCCGTCT CCCTGGCCGA GAAGGGCAAG
CGTGTGCTTG TGCTCGATGC CGACTTGGGG CTAGCCAACG TCGATGTCAT GTTGGGCCTG
AGAGCCGAGC GCAATCTCTC CCACGTATTA TCTGGCGACG CTGACCTTGA CGATATTATC
GTACGTGGTC CAAAGGGGAT TGGCATTATT CCAGCCACCT CTGGCACCCA GGCCATGGTC
GAGCTGACAC CGGCCCAGCA TGCGGGCCTG ATCCGTGCCT TCAGCGAGAT GAAGACCCAG
TTTGATATCC TGGTGGTCGA TACAGCGGCA GGTATCTCAG ACATGGTGCT CAGCTTCTCT
CGCGCCTCTC AAGATGTGTT GGTTGTGGTG TGCGACGAGC CGACCTCTAT TACCGACGCC
TATGCTTTGA TTAAGATTCT TAGCCGTGAG CATGGCGTAT TCAGATTTAA GATTGTGGCA
AACATGGTTA GAAGTTTGCG AGAAGGGATG GAGTTGTTTG CTAAACTTAG CAAGGTAACC
GACCGTTTTC TCGACGTGGC CCTGGAGCTG GTTGCGACTA TCCCCTTCGA TGAAAACCTT
CGCAAATCAG TTCGTAAACA AAAGTTGATC GTCGAGGCAT TTCCTAAGTC ACCGGCGTCA
ATTGCTTATC ACGGCCTAGC GAATAAGATC ATTAGCTGGC CAGTGCCACA ACAACCGGGC
GGACACCTGG AGTTCTTTGT AGAGCGATTG GTTCAACGTC CCGAATATCA AGAGGATCGT
ACGAGTGAGT AA
|
|---|
| Protein sequence | MNRPTHLSNI MSRDQASGLR MMNQPYNEKV KVIAVTGGKG GVGKTSVSIN TAVSLAEKGK
RVLVLDADLG LANVDVMLGL RAERNLSHVL SGDADLDDII VRGPKGIGII PATSGTQAMV
ELTPAQHAGL IRAFSEMKTQ FDILVVDTAA GISDMVLSFS RASQDVLVVV CDEPTSITDA
YALIKILSRE HGVFRFKIVA NMVRSLREGM ELFAKLSKVT DRFLDVALEL VATIPFDENL
RKSVRKQKLI VEAFPKSPAS IAYHGLANKI ISWPVPQQPG GHLEFFVERL VQRPEYQEDR
TSE
|
|---|
| |