| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1379 |
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| Symbol | flhB |
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| ID | 4922894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1587033 |
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| End bp | 1588166 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640162920 |
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| Product | flagellar biosynthesis protein FlhB |
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| Protein accession | YP_001093507 |
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| Protein GI | 127512310 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
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| TIGRFAM ID | [TIGR00328] flagellar biosynthetic protein FlhB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.294814 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATA ACGATACCAG TCAGGAGAAG ACCGAAGAGG CGACCCCCAG GCGACGCGAA
CAGGCGCGAG AGAAAGGGCA GGTCGCCCGA TCTAAGGAGC TGGGCACCTC AGCTGTGTTG
ATGTCGGCGG CGGTAGGGTT TGCCGTCATA GGGCCGAGCC TGGGCCAGTC GTTGATGAGC
GTGATGACCA AGCTGTTTAC CATGAGCAGA CAGGAGATCT ACGACACCAA TAGCCTGTTC
AATATCTGGA TGATGGTCTT CAAGGAGCTG GCGATCCCTA TGGCCAGCTT CGTGCTGTTT
CTCGCCTTTA TCGCCTTCTT GGGTAACGTG GTGCTCGGTG GGATAACCTT CTCCGCCAAG
GCGTTCATGC CCAAGGGTAA TAAGATGAAT CCCATCAGCG GCTTTAAGCG TATGTTCGGG
GTACAAGCCC TGGTGGAGCT GACTAAGGGA ATCGCCAAAT TCTCCGTGGT GGCCCTGATG
GCCTATCTGC TGCTGAGCTA CTATTTCAAC GATATTCTTA CCCTGTCCCA GGGGCATCTG
CCGGGCAATG TCTATAACGC CCTGGATCTG CTGGTGTGGA TGTTTATTGT GCTCTGCTCC
TCTACCGTGA TCATCGTGGT GATCGATGTG CCGTTTCAGA TCTGGAACCA CAATAAACAG
CTGAGAATGA CCAAGCAGGA GATCAAGGAC GAGTACAAGG ACACCGAGGG TCAGCCTGAG
GTGAAAGGCC GGGTGCGTCA GATGCAGCGT GAGATGGCGC AGCGGCGCAT GATGGCCGAG
GTGCCCAATG CCGACGTGAT TGTGGTCAAC CCAGAGCACT ATGCTGTGGC GGTAAAATAT
GATGTGACCA AGGCCGCCGC GCCCTATGTG CTTGCCAAGG GGGTAGACGA TGTGGCCTTT
AAGATCCGTG AGATCGCCCG CGAGCATGAT GTAGCCATCG TCTCGGCGCC GCCATTGGCC
AGGGCCATCT ATCACACCAC CAAGATAGAT CAGGAGATCC CCGAGGGGCT GTTTACTGCC
GTGGCCCAGG TATTGGCTTA TGTGTTCCAA CTGCGTCAAT ATCAGCAAAA AGGTGGTAAG
CGTCCGACAC CTATCCCTAT CAATCAGCCG ATCCCTGATG AGCTAAAATA CTAA
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| Protein sequence | MADNDTSQEK TEEATPRRRE QAREKGQVAR SKELGTSAVL MSAAVGFAVI GPSLGQSLMS
VMTKLFTMSR QEIYDTNSLF NIWMMVFKEL AIPMASFVLF LAFIAFLGNV VLGGITFSAK
AFMPKGNKMN PISGFKRMFG VQALVELTKG IAKFSVVALM AYLLLSYYFN DILTLSQGHL
PGNVYNALDL LVWMFIVLCS STVIIVVIDV PFQIWNHNKQ LRMTKQEIKD EYKDTEGQPE
VKGRVRQMQR EMAQRRMMAE VPNADVIVVN PEHYAVAVKY DVTKAAAPYV LAKGVDDVAF
KIREIAREHD VAIVSAPPLA RAIYHTTKID QEIPEGLFTA VAQVLAYVFQ LRQYQQKGGK
RPTPIPINQP IPDELKY
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