| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1377 |
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| Symbol | |
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| ID | 4922834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1585924 |
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| End bp | 1586193 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162918 |
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| Product | flagellar biosynthetic protein FliQ |
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| Protein accession | YP_001093505 |
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| Protein GI | 127512308 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1987] Flagellar biosynthesis pathway, component FliQ |
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| TIGRFAM ID | [TIGR01402] flagellar biosynthetic protein FliQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.986753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.259013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACCCG AAGCCCTCAT CGACATCTTT CGTGAAGCCC TCTCGGTTAT CGTGACCATA
GTGTCGATGA TCATCGTGCC CGGGCTGGTG GTGGGTCTGG TGGTGGCGGT GTTTCAGGCG
GCGACCTCGA TCAACGAGCA GACCCTGAGC TTCCTGCCCC GTCTACTGAC CACGCTCTTT
GCCCTGATGA TCTTAGGCCA TCTGCTGGTG CAGACCATGA TGGAGTTTTT CCTGCAGATG
GTGAATCTTA TCCCTCAGGT GGTGGGCTAG
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| Protein sequence | MTPEALIDIF REALSVIVTI VSMIIVPGLV VGLVVAVFQA ATSINEQTLS FLPRLLTTLF
ALMILGHLLV QTMMEFFLQM VNLIPQVVG
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