| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1376 |
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| Symbol | fliP |
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| ID | 4922266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1585148 |
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| End bp | 1585915 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640162917 |
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| Product | flagellar biosynthesis protein FliP |
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| Protein accession | YP_001093504 |
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| Protein GI | 127512307 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
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| TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.831081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.157907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCCAA TAAAAATCAT GAAACGGATC TTGACCCCAC TCTTGTTACT CCTGGCCGTG
ATGGCGCCGC AACTGGCACT GGCACAGGAT GGGATTCTCC CTGCGGTAAC TGTCACCACA
GGCGCCGATG GCTCGACCCA ATATTCGGTG ACCATGCAGA TATTGCTGCT GATGACGGCG
CTGAGTTTTC TGCCCGCCAT GGTCATCATG CTGACCTCTT TTACCCGCAT CATAGTGGTG
CTGTCGATTC TGCGCCAGGC GATCGGCCTG CAGCAGACGC CGTCGAATCA GGTGCTGATC
GGTATGAGTC TGTTTATGAC CTTCTTCATC ATGGCGCCCG TGTTCGACAA GATCTACGAC
CAGGCGGTGA AGCCGTATAT CGACGAGACC ATGACCATAG AGCAGGCCTA TGACAAGGGC
AAGGAGCCGC TGCGGGCCTT TATGTTGGCT CAGACCCGGC TCACGGATTT GGAGACCTTC
GTCCAGATCT CTGGCTATCA GAATATTCAG TCGCCCGAAG ATGCGCCCAT GAGCGTGCTG
ATCCCTGCTT TCATTACCAG TGAACTCAAG ACCGCCTTCC AGATAGGCTT CATGCTGTTC
GTGCCCTTCC TGGTGCTTGA TCTCGTGGTG GCCAGTATCC TGATGGCCAT GGGTATGATG
ATGCTGTCGC CCATGATCGT CTCCTTGCCC TTTAAGATCA TGTTGTTTGT GTTAGTGGAT
GGTTGGAGCC TGGTGATGGG CACCCTGGCC AACAGTTTTG GGATCTAG
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| Protein sequence | MNPIKIMKRI LTPLLLLLAV MAPQLALAQD GILPAVTVTT GADGSTQYSV TMQILLLMTA
LSFLPAMVIM LTSFTRIIVV LSILRQAIGL QQTPSNQVLI GMSLFMTFFI MAPVFDKIYD
QAVKPYIDET MTIEQAYDKG KEPLRAFMLA QTRLTDLETF VQISGYQNIQ SPEDAPMSVL
IPAFITSELK TAFQIGFMLF VPFLVLDLVV ASILMAMGMM MLSPMIVSLP FKIMLFVLVD
GWSLVMGTLA NSFGI
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