| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1371 |
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| Symbol | |
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| ID | 4923153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1580960 |
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| End bp | 1582666 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640162912 |
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| Product | flagellar hook-length control protein |
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| Protein accession | YP_001093499 |
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| Protein GI | 127512302 |
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| COG category | [N] Cell motility |
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| COG ID | [COG3144] Flagellar hook-length control protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.358506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.685511 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACAGA TGACCCAAAT ACTCCTATCT AATGTCGAGC CCGGCAAAGA GAAAGTCGGG
GTGTTGCCCA GTGCATCAGA TGCGAAGTCG ACCGCAGAGT CTAAGTCAGA AAACAAAGGT
TTTTCAGAGG CTTTGGCTAA GGCGAGTGGC CAGGATGAGG TGAACTCACA GGCAAAAACG
CGCCACCAGT CCCAAGCCGA AAACGTGGCT CAACGCGATA ACACTGATAA GGCCGATGTT
AAGCAGGAGA AGGCGCCCAC GCAGGACAAA GAGAGCGACG ATGTCTCCAA CGTGCTGGCG
CAGATCCATC TGGCGAACAA GCTGGGGGAT GAGGCGGAAT TTGCCGCCGA CGGCGTCATT
TTGCCGCCGG GTGATGCTGA TGGTGAGTCA TCTGCCGACA ATGAGCTGCT TCCTACCTTT
GTAAAAGGGG CTAAGGACAA GGTCGATACC GAAAAAGCGG CCTTAGAGGG TATAGATGAG
CTGCTTAACC CCGGCGCCGG AGATGATCAT ATCTTACCCG TCATCAATCC AAATAGCCTG
GGGAGCGAGG CGATATTGGC TCAGCTTCCC GAAGATGCTT TAAGTGAGGT GATGGCGCAA
ACCGGTTTGT CCAAGGATGA GCTGACGGCC TTACCGCCGC AGATGCTAGA GGGGCTTATT
CATGGCATAG CGGGTAAGAA TAAGTCTGGA AATGGTGAGC TTGGTCAAGC TGAGGCGCTA
GAGAGTGATG CTGCCAAGCT GGCGGCACTT ATTAATGACG CCAAGCAATA TCTCTCGGCC
AAGGCGAGTC AGTCGCAAAG CAACCTTGCT GCAACTCAAA CTGAGCCTTC ACAAGGTGCA
GGCGGTGCCA GTCAGGCGGG ACTAAATCAG GTTGGGCTAA ATCAGAATGA GATTAGTCAA
ACAGGCCTAA CCTCGGCCAA TAACGCGAGC GGCGTGGAAA GTGCCGTTAA TGAGAAAGGC
GTGAAAGCCA TATTGGGTGA ATCCAAGGTT GGTGAGTCTA AGTTTGGTGA AGCTAAGCTA
GCTGACGCCA AGCTTGCCGC CGAGCAGGCA CAAAATGGTG CTCTGAAGAC GACCTCGGGC
GCAGAGGGCC GCGATGGCAA AGCCGCGCAG GAGCTGCTGA AGGGCGCTAA CCTTGCCGTG
ACCATGTCGC CAAAGGCCGG TGAAATGCCA GATGCCGCGG CAGATACTAA GCTAAACGCC
TTATCGCTGC AGGGCTTGCA AGGCGCAAGA AATGAGGTCC TCCCACAATA TCAAGTTTCT
ATCAAGCCTC AGGGCGAACC TGTGACGCAG ATGCAGGAGA TGATCCATAA ATTCTCGCCC
GTGATGCGTC AGCAGCTGGT GGCCATGGTG AGCCAAGGCG TGCAGCAGGC TGAGATTCGC
CTGGATCCGC CCGAGCTTGG CCACATGATG GTTCGGGTTC AGGTGCAGGG CGACCAGACT
CAGGTGCAGT TTCATGTAAC CCAGACCCAG ACGCGGGATC TGGTTGAGCA AGCCATCCCG
CGTCTGCGAG AGCTACTGGC CGAGCAGGGG ATGCAGCTGA CCGATAGTAA CGTCTCTCAA
GGCGGCAAAG AGCAGGGCGG CAATGGCGAG CAAGGCGAGG GAGTGGGCCA TGGTCTGTCT
GAGATGGATG AAATTTCGGC AGAAGAGAGC CTGTTAGTGT CGAATAACGC AACAAGTTAT
CGTTCGGGTA TAGATTATTA CGCGTAA
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| Protein sequence | MPQMTQILLS NVEPGKEKVG VLPSASDAKS TAESKSENKG FSEALAKASG QDEVNSQAKT
RHQSQAENVA QRDNTDKADV KQEKAPTQDK ESDDVSNVLA QIHLANKLGD EAEFAADGVI
LPPGDADGES SADNELLPTF VKGAKDKVDT EKAALEGIDE LLNPGAGDDH ILPVINPNSL
GSEAILAQLP EDALSEVMAQ TGLSKDELTA LPPQMLEGLI HGIAGKNKSG NGELGQAEAL
ESDAAKLAAL INDAKQYLSA KASQSQSNLA ATQTEPSQGA GGASQAGLNQ VGLNQNEISQ
TGLTSANNAS GVESAVNEKG VKAILGESKV GESKFGEAKL ADAKLAAEQA QNGALKTTSG
AEGRDGKAAQ ELLKGANLAV TMSPKAGEMP DAAADTKLNA LSLQGLQGAR NEVLPQYQVS
IKPQGEPVTQ MQEMIHKFSP VMRQQLVAMV SQGVQQAEIR LDPPELGHMM VRVQVQGDQT
QVQFHVTQTQ TRDLVEQAIP RLRELLAEQG MQLTDSNVSQ GGKEQGGNGE QGEGVGHGLS
EMDEISAEES LLVSNNATSY RSGIDYYA
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