| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1368 |
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| Symbol | |
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| ID | 4924149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1577772 |
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| End bp | 1578791 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162909 |
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| Product | flagellar assembly protein FliH |
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| Protein accession | YP_001093496 |
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| Protein GI | 127512299 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.981358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGT CTGGCGACAA GAAGCCCCAA GAGGGCAAAG GCGTACACAC CACACAAGCC
GATTTTAGCC ATTGGCAGCT GCCGGATGTG ACCCCTGTGG TGCATGAGCC CAAGGAGAAC
ATGTTCGGCC GCATCGCCCC GCAAAAGGCG GCTAAGGCGG TCGATGAGCC GGTGATGCCC
CCCACCCTGG AAGAGATCGA GTCGATCCGC GCCGAGGCCG AGGCCGAAGG CTTCGCTCAG
GGCCAGGAAG CCGGTATGGC CAAGGGCTTG GAAGAGGGGC GACTGAAAGG CCTGGAGCAG
GGCCACGAAG AGGGCTATCG TCAAGGACAG GCTCAGGGTA TGGAGGCCGG CCTCGTCGAG
GCCAAACAGA CGATTGCGCA TTTTGAAGCC CTGATGCAGC AGTTATCAAT GCCGCTCTCT
CTGCTCGACA CCGAAATAGA ACAAGCCTTG GTACAACTGA GCATGACGCT GGCTAAGGCG
GTGATCGGCC ATGAGCTTAA GACACATCCC GAACATATTC TAGCCGCCCT GCGTCAAGGG
GTCGACGCCC TACCGCTGAA AGAGCAAGGG GCGCATCTGC GTCTACATCC AGAGGATCTC
GCTATCGTCG AGCGACTCTA TGAAAGCGCG CAGCTAACAA AAAATCATTG GGAGTTAGAG
GCCGACCCGA CCTTGAGCCG CGGCGAGTGT ATCGTAAGCA ACAGCCGTAG CCGGGTGGAT
ATGGGGCTGG AGCATCGCAT CAAGGCGGTG TTCGATAAGC TTATCGCCAG TGAGCAGCGC
CTCGAGCAGC AAAGGCTACA ACAGCTAGCT GCCATGGAGA AGGTCCCCGA GCATCAAGAC
CAAAACCAAG ACCTAGACGG CGACGCTGCG CAAGCGGGCC TCGAAACAGA TAGCCAGACA
AGCGATCCGC AACAAACGCA AGTAGTTGAC GCATCGCAAG TCGCGCCGAG CGAACAGATT
GCACCTGACG CACCGCAAGA GACGAGCCCA GATGAAGACA CGTCAAAACC GGCTTCTTGA
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| Protein sequence | MTMSGDKKPQ EGKGVHTTQA DFSHWQLPDV TPVVHEPKEN MFGRIAPQKA AKAVDEPVMP
PTLEEIESIR AEAEAEGFAQ GQEAGMAKGL EEGRLKGLEQ GHEEGYRQGQ AQGMEAGLVE
AKQTIAHFEA LMQQLSMPLS LLDTEIEQAL VQLSMTLAKA VIGHELKTHP EHILAALRQG
VDALPLKEQG AHLRLHPEDL AIVERLYESA QLTKNHWELE ADPTLSRGEC IVSNSRSRVD
MGLEHRIKAV FDKLIASEQR LEQQRLQQLA AMEKVPEHQD QNQDLDGDAA QAGLETDSQT
SDPQQTQVVD ASQVAPSEQI APDAPQETSP DEDTSKPAS
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