| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1359 |
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| Symbol | |
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| ID | 4922204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1568033 |
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| End bp | 1569406 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640162900 |
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| Product | flagellar hook-associated 2 domain-containing protein |
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| Protein accession | YP_001093487 |
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| Protein GI | 127512290 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1345] Flagellar capping protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTAA CGGCAACAGG CATAGGTTCA GGGCTTGATA TCAACACGAT TGTGGGGGTG
CTGGTTGATG CTGAGAAGGT GCCTAAAGAA GCGATCTTTA ATAAGACAGA AGACACAATC
GATGCGAAAG TCTCAGCCAT GGGCTCGCTA AAGAGTGCTC TGTCAAAGTT TCAGGATGCC
CTTGAAAAAC TCAAAGATGG CAGCAGTCTA AATCAACGTC AGGTGTCAAC CGGTGACAGC
AGTTTCTTTA CGGCTACGGC TGATAAGAAT GCCCAGACGG GTAGCTATAA CATAGTCGTA
GAGCAACTCG CCCAGCGTCA CAAGGTGGCA GGGGCCTTCA CGGCAGATGC CAGTGCAGCA
GTAGGTGAGG GCAGTCTCGG CTTTACCGTT AATGGTCAGA GTTTCTCGGT CGATGTGGCC
GCGGGAGACT CGCTGTCAGC CATTGCAGAC AAGATTAACA GTGCCGACGA CAATGTCGGG
GTTACCGCAA CGATAGTTAC TACCGATGGT GGCAGTCGTC TGGTGATCAG TTCCGATACC
GAAGGGCCGG ATAATAACAT CAGCGTAACT GCAAGCGATA CGTCTGGTAC AGGTCTTAGC
GACATGTTTG GCCTAGGAAA TCTGAGCGAA GTGCAGGCCG CCAAAGAGTC AATTGTTTAC
ATAGATGGTC AGAAGCTACA GTCGCAAACC AACGAAATCA AAAATGCGAT AGCCGGCGTG
ACCCTTAATC TCACCGACGC CGATCTCAAT AAGACCTCTG TACTTAAGAT CGAACTCGAT
GAAGATGCGG TAAAAGAGAA TGTTCAGGGT TTTGTCGACG CCTATAACAG CTTAATGAGC
ACCATAGATA AGGTCTCTTC CTATGATGCG GAAAAGGAAG TGGCATCGGC ACTCCAAGGG
GATTCGATGA TACGATCAAT CGAGTCTCAG ATGCGTAATA TGATTTCAAA TCGTGTCGAT
CTTGGTGGTG GGCAGTCGGT TGCCCTCTAT GACATAGGCA TAGAGGCGGA TCGCTACGGC
AAACTGTCGG TCAATAGCAC TAAGCTGGAT AAAGCCATCA GTGAAGATAT GAGTAGCATC
GAGAGTTTGT TTGCGACAGA TACCACAGGT TTGGCCAACA GATTGGATAG TTTAGTTGAG
GGTTACGTTA AGAGTGGTGG CCTGATCGAT TCTCGTAATA ATATCTACAC CGCTGATAAG
AAGCGACTCG ATGCGCAGCG CGAAGCATTT TCTTTGAAGA TGGAGCAATT AGAATCCCGT
CTATTTAAGC AGTTTAATGC GATGGATCTG GTTGTGGGTA AGCTGAATCA ACAGTCTGCT
GGTATTGTTA ATGGGCTGAA CTCGCTACCA GGCGTTGTTT CTCAGAAAGC CTAG
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| Protein sequence | MALTATGIGS GLDINTIVGV LVDAEKVPKE AIFNKTEDTI DAKVSAMGSL KSALSKFQDA
LEKLKDGSSL NQRQVSTGDS SFFTATADKN AQTGSYNIVV EQLAQRHKVA GAFTADASAA
VGEGSLGFTV NGQSFSVDVA AGDSLSAIAD KINSADDNVG VTATIVTTDG GSRLVISSDT
EGPDNNISVT ASDTSGTGLS DMFGLGNLSE VQAAKESIVY IDGQKLQSQT NEIKNAIAGV
TLNLTDADLN KTSVLKIELD EDAVKENVQG FVDAYNSLMS TIDKVSSYDA EKEVASALQG
DSMIRSIESQ MRNMISNRVD LGGGQSVALY DIGIEADRYG KLSVNSTKLD KAISEDMSSI
ESLFATDTTG LANRLDSLVE GYVKSGGLID SRNNIYTADK KRLDAQREAF SLKMEQLESR
LFKQFNAMDL VVGKLNQQSA GIVNGLNSLP GVVSQKA
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