Gene Shew_1358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1358 
Symbol 
ID4922436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1567613 
End bp1568002 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content44% 
IMG OID640162899 
Productflagellar protein FlaG protein 
Protein accessionYP_001093486 
Protein GI127512289 
COG category[N] Cell motility 
COG ID[COG1334] Uncharacterized flagellar protein FlaG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATTA ATACTGTTAA TTCATCCAAT GCTACAGCTG CTAAAATTGA TATAGGCATG 
ACGCCTGTTA AAGCAAATGC GGCAGAGGAC GTGGAATTAG CCAAAGGTTC GATCAAGGCG
GTCGAACAGA GCAATCAAGC CGAAGCGGCT CAGGCCGAAG AGCAATCGCC CGAAGCGATG
CAGAAGTTGG TTGAAGAGAT GTCAAATATG ATGTCTGTGA TGCGTAAAGG CTTGGCTTTT
AAGATTGACG AAGATTCTGG CACAAATATT GTTAGCGTTA TGGACATTGA TTCGGGTGAT
GTGATCCGTC AAATTCCAAA CGAAGAAGCA TTGAGGTTGG CGCAGAAACT TTCTGAAGTC
ACTGGATTAT TAATGAAAAC TGAAGCCTAG
 
Protein sequence
MDINTVNSSN ATAAKIDIGM TPVKANAAED VELAKGSIKA VEQSNQAEAA QAEEQSPEAM 
QKLVEEMSNM MSVMRKGLAF KIDEDSGTNI VSVMDIDSGD VIRQIPNEEA LRLAQKLSEV
TGLLMKTEA