Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1352 |
Symbol | flgI |
ID | 4922527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1560197 |
End bp | 1561288 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640162893 |
Product | flagellar basal body P-ring protein |
Protein accession | YP_001093480 |
Protein GI | 127512283 |
COG category | [N] Cell motility |
COG ID | [COG1706] Flagellar basal-body P-ring protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATAA AATTAATATT GGCCTGTGCC CTGATGGTGT TTTCCGCAGC CAGCTCGGCC CAGCGCATCA AAGATATCGC CAACGTACAA GGAGTGCGTA GCAACCAGCT GATCGGCTAT GGTCTGGTGG TCGGCTTGCC GGGTACCGGC GAGAAGACAC GTTATACCGA GCAGACCTTC AAGACCATGC TGAAAAACTT CGGCATCAAT CTGCCCGATA ACTTCCGTCC TAAGATCAAG AACGTCGCCG TGGTGGCGGT AAGTGCCGAC ATGCCCGCCT TTATCAAGCC GGGCCAGACG CTTGATGTCA CCGTCTCTAG CCTAGGTGAG GCCAAGAGCC TGCGCGGCGG TACCTTGCTG CAGACCTTCC TCAAGGGCGT CGACGGTAAC GTGTATGCCA TTGCCCAGGG CAGCATGGTG GTCAGTGGCT TTAGCGCCGA AGGACTCGAT GGCTCTAAGG TGATTCAAAA TACGCCTACC GTGGGTCGTA TCCCTAACGG CGCCATCGTC GAGCGCACCG TGGCGACGCC ATTTTCTACC GGCGATCATC TGACCTTTAA TCTGCGCCGC GCCGATTTTT CGACGGCTAA ACGTCTCGCC GATGCCATCA ATGATCTCTT AGGCCCTGGC ATGGCCCGTC CACTGGATGC CGCCTCGGTG CAGGTGAGTG CGCCGCGGGA TGTGTCCCAG CGTGTCTCAT TTCTGGCGAC CTTGGAAAAC ATCGAGGTGG AGCCAGCGTC CGAGTCGGCC AAGGTGATCG TCAATTCCCG TACCGGCACC ATAGTGGTGG GTAAAGATGT GCGCCTGCTG CCGGCGGCGG TGACCCATGG CGGCCTGACG GTAACCATCG CCGAGGCGAC CCAGGTGTCT CAGCCTAATC CCTTGGCGGG GGGCGATACC GTGGTGACCA GCGACAGCAC CATAGATGTG TCCGAAGCGG ATAATCGCAT GTTCCTGTTT AACCCTGGTA CTACCCTCGA TGAGTTGGTG CGGGCGGTGA ATCTGGTCGG CGCCGCGCCA TCTGACGTGT TAGCCATACT GGAAGCGTTA AAGGTGGCAG GTGCTTTGCA TGGTGAGCTT ATCATCATCT AA
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Protein sequence | MKIKLILACA LMVFSAASSA QRIKDIANVQ GVRSNQLIGY GLVVGLPGTG EKTRYTEQTF KTMLKNFGIN LPDNFRPKIK NVAVVAVSAD MPAFIKPGQT LDVTVSSLGE AKSLRGGTLL QTFLKGVDGN VYAIAQGSMV VSGFSAEGLD GSKVIQNTPT VGRIPNGAIV ERTVATPFST GDHLTFNLRR ADFSTAKRLA DAINDLLGPG MARPLDAASV QVSAPRDVSQ RVSFLATLEN IEVEPASESA KVIVNSRTGT IVVGKDVRLL PAAVTHGGLT VTIAEATQVS QPNPLAGGDT VVTSDSTIDV SEADNRMFLF NPGTTLDELV RAVNLVGAAP SDVLAILEAL KVAGALHGEL III
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