Gene Shew_1352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1352 
SymbolflgI 
ID4922527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1560197 
End bp1561288 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content58% 
IMG OID640162893 
Productflagellar basal body P-ring protein 
Protein accessionYP_001093480 
Protein GI127512283 
COG category[N] Cell motility 
COG ID[COG1706] Flagellar basal-body P-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAA AATTAATATT GGCCTGTGCC CTGATGGTGT TTTCCGCAGC CAGCTCGGCC 
CAGCGCATCA AAGATATCGC CAACGTACAA GGAGTGCGTA GCAACCAGCT GATCGGCTAT
GGTCTGGTGG TCGGCTTGCC GGGTACCGGC GAGAAGACAC GTTATACCGA GCAGACCTTC
AAGACCATGC TGAAAAACTT CGGCATCAAT CTGCCCGATA ACTTCCGTCC TAAGATCAAG
AACGTCGCCG TGGTGGCGGT AAGTGCCGAC ATGCCCGCCT TTATCAAGCC GGGCCAGACG
CTTGATGTCA CCGTCTCTAG CCTAGGTGAG GCCAAGAGCC TGCGCGGCGG TACCTTGCTG
CAGACCTTCC TCAAGGGCGT CGACGGTAAC GTGTATGCCA TTGCCCAGGG CAGCATGGTG
GTCAGTGGCT TTAGCGCCGA AGGACTCGAT GGCTCTAAGG TGATTCAAAA TACGCCTACC
GTGGGTCGTA TCCCTAACGG CGCCATCGTC GAGCGCACCG TGGCGACGCC ATTTTCTACC
GGCGATCATC TGACCTTTAA TCTGCGCCGC GCCGATTTTT CGACGGCTAA ACGTCTCGCC
GATGCCATCA ATGATCTCTT AGGCCCTGGC ATGGCCCGTC CACTGGATGC CGCCTCGGTG
CAGGTGAGTG CGCCGCGGGA TGTGTCCCAG CGTGTCTCAT TTCTGGCGAC CTTGGAAAAC
ATCGAGGTGG AGCCAGCGTC CGAGTCGGCC AAGGTGATCG TCAATTCCCG TACCGGCACC
ATAGTGGTGG GTAAAGATGT GCGCCTGCTG CCGGCGGCGG TGACCCATGG CGGCCTGACG
GTAACCATCG CCGAGGCGAC CCAGGTGTCT CAGCCTAATC CCTTGGCGGG GGGCGATACC
GTGGTGACCA GCGACAGCAC CATAGATGTG TCCGAAGCGG ATAATCGCAT GTTCCTGTTT
AACCCTGGTA CTACCCTCGA TGAGTTGGTG CGGGCGGTGA ATCTGGTCGG CGCCGCGCCA
TCTGACGTGT TAGCCATACT GGAAGCGTTA AAGGTGGCAG GTGCTTTGCA TGGTGAGCTT
ATCATCATCT AA
 
Protein sequence
MKIKLILACA LMVFSAASSA QRIKDIANVQ GVRSNQLIGY GLVVGLPGTG EKTRYTEQTF 
KTMLKNFGIN LPDNFRPKIK NVAVVAVSAD MPAFIKPGQT LDVTVSSLGE AKSLRGGTLL
QTFLKGVDGN VYAIAQGSMV VSGFSAEGLD GSKVIQNTPT VGRIPNGAIV ERTVATPFST
GDHLTFNLRR ADFSTAKRLA DAINDLLGPG MARPLDAASV QVSAPRDVSQ RVSFLATLEN
IEVEPASESA KVIVNSRTGT IVVGKDVRLL PAAVTHGGLT VTIAEATQVS QPNPLAGGDT
VVTSDSTIDV SEADNRMFLF NPGTTLDELV RAVNLVGAAP SDVLAILEAL KVAGALHGEL
III