| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1347 |
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| Symbol | flgD |
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| ID | 4920519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1555522 |
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| End bp | 1556304 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640162888 |
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| Product | flagellar basal body rod modification protein |
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| Protein accession | YP_001093475 |
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| Protein GI | 127512278 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1843] Flagellar hook capping protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.796846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCCTAG TTAATCCGTT AAATACTCAG GTTGCGCAAA CCAGTTCGAC CCAGAGCGCC
AAGTCGGTGA CGCCTCAGGC GTCGAGCAGT CAGGCAACCA CCCAGACTAC GGGAAATCCG
TTTCTCGACA GCATGCGCCT GCAAGAGGAG TCCTCGATCC CTGAGGCCAA GAGTCAGGAG
CTGACCCAGG AGGATTTCTT CTCCCTGCTC AGTCAGCAGC TGTCGATGCA GGATCCTTTT
AAGCCGGTGG ACAACGATCA GATGATCGCC CAGATGGCGT CTTTCTCCAC CGTGGATGGC
ATCACTAAGC TCAACGAGGA GATAGTTAAC CTCAATACCG TGATGACCTC GAGCCAGGCG
CTGCAGGCCT CGGGGCTAGT GGGGCAGAAG GTGTTGATCC CATCGGATAC CGGGCATATC
TCGGCGGAAG ATCCCGTGCT CAAAGGGGTG ATCAGTACCC CTGAGCCTAT CGAGTCGATA
ACCGTGCGAA TCGAAGATGA GAAGGGCCAG CTAGTGAAGA CCTTCACCGT CGATGGTAGC
GACGGCGGCA ACATAGATGT CTCCTGGGAT GGACTGGATA AGGATGGGGA GCCCGTTGCC
AGTGGTAATT ATTCCATTAA GGCATCGGGC AAGGTAGATG GTAAGAGTGA AGATTTAGCC
GTATCGACCT ACGCTCACGT GACGAGTGTT TCGCTGGGAA CGGCAAGTAC CGGCGCAATT
CTCAACTTGA GAGGCATAGG CGGTATCAAA CTCGGTGATG TTCTGGCCGT GTCTGAAACC
TAG
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| Protein sequence | MSLVNPLNTQ VAQTSSTQSA KSVTPQASSS QATTQTTGNP FLDSMRLQEE SSIPEAKSQE
LTQEDFFSLL SQQLSMQDPF KPVDNDQMIA QMASFSTVDG ITKLNEEIVN LNTVMTSSQA
LQASGLVGQK VLIPSDTGHI SAEDPVLKGV ISTPEPIESI TVRIEDEKGQ LVKTFTVDGS
DGGNIDVSWD GLDKDGEPVA SGNYSIKASG KVDGKSEDLA VSTYAHVTSV SLGTASTGAI
LNLRGIGGIK LGDVLAVSET
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