| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1343 |
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| Symbol | |
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| ID | 4920486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1552605 |
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| End bp | 1553525 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640162884 |
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| Product | response regulator receiver modulated CheW protein |
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| Protein accession | YP_001093471 |
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| Protein GI | 127512274 |
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| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.447173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGAGTA TTCTTGAATC AGTTAACAAA CGCACCCAAC TTGTAGGACA AAACCGCTTA
GAGCTATTGC TGTTTAAGTT AAACGGGCGG CAAAGGTTTG GCATTAACGT ATTTAAGGTG
AAAGAGGTGC TGCAGTGCCC GCCACTGACA GGCCTGCCTA AGCTCAATCC CTATGTGAGG
GGCGTGGCTC ATATTCGCGG CCAGACCATT TCGGTGATCG ATCTCAGTGC GGCCACCGGC
GGCAGACCGA TAGAAGATAC AGAAGGCTGC TTCATCATCA TCTCCGAGTA CAACCGCAGT
GTGCAGGGGT TCCTGGTTAA GTCGGTCGAG CGCATCATCA ACATGAACTG GGAGGCGATC
ATGCCGCCGC CGCAAGGCGC AGGGCGCTAC TCCTACCTGA CCGCCGTGAC CGAGATTGAG
GGGGAGCTGG TGGAGATCCT CGATGTCGAG AAGATCCTCG ACGAGATCTC GCCGGTGAAG
ACTCAGATCA GTCAGGAAGT CGACGAGCAG TTGACCATAG ACAGAGAGCG TCATTATCAC
ATCATGGTGA TCGATGATTC GGCCGTGGCG CGTAAGCAGA TCATTCGTGC CCTGGAATCT
TTGAGCCTGC AGATAGATAC CGCCAAAGAT GGCCGCGAGG CCTTAGATAA GCTGGTAAGC
GTCGCCGCCG AGATGGATAA CGTAGCCCAT GAGATCCCGC TAATCATTTC CGATATCGAG
ATGCCAGAGA TGGATGGTTA TACCCTGACG GCAGAGATCC GCGATAACCC TAAATTGAAA
GACATTAAGG TAGTGCTGCA TACCTCGCTC AGTGGCGTAT TTAACCAGGC CATGGTGGAG
AAGGTGGGCG CTAATGACTT TATCGCCAAA TTTAATCCTG ATGAATTAGC GGCGGCGGTG
AATAAGCATC TTAGTTTGTA A
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| Protein sequence | MSSILESVNK RTQLVGQNRL ELLLFKLNGR QRFGINVFKV KEVLQCPPLT GLPKLNPYVR
GVAHIRGQTI SVIDLSAATG GRPIEDTEGC FIIISEYNRS VQGFLVKSVE RIINMNWEAI
MPPPQGAGRY SYLTAVTEIE GELVEILDVE KILDEISPVK TQISQEVDEQ LTIDRERHYH
IMVIDDSAVA RKQIIRALES LSLQIDTAKD GREALDKLVS VAAEMDNVAH EIPLIISDIE
MPEMDGYTLT AEIRDNPKLK DIKVVLHTSL SGVFNQAMVE KVGANDFIAK FNPDELAAAV
NKHLSL
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