| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1334 |
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| Symbol | |
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| ID | 4923853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1545341 |
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| End bp | 1546363 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640162874 |
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| Product | 3-oxoacyl-(acyl-carrier-protein) synthase |
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| Protein accession | YP_001093462 |
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| Protein GI | 127512265 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
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| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTA CTTCCGTGAA CAAGGTGTCG ATCACAGGCA TTGTCTCCGT CTTACCTGAA
ATTAGTTGTG AAAATATTGA TGAATCTTCG AGTAGTGCAA GAGAAGAGAT GGCTCGTATT
GTTGCCTCGA CCGGGATTCG CGCAAGACGT GTTGCTTCAG CTGACCAAAC CGCGTTATCG
CTTGGTAAAG TAGCATGTGA ATCATTGATA GATGCAATGG ATTGGAAGCC GGAGGAGATT
TCGCTCGTCG TCTTTGTTAC CCAAACCCCG GATTACCCTT TGCCAGGGAA TGCAGTCCAG
TTGCAACATC AGCTTGGCTT GAGCAAAGAT ACTATCGCCT ATGATGTAAA CTTGGGATGT
TCAGGGTTTG TTTATGGTTT ATGGCAAGTT GCGCAGTTAG TAGCAGGACT GTCAAAGGGT
AAAGCGCTAT TGGTTGTGGG GGATACAACG ACACATCAAT ATCGTCAGGA TAATCGAGCG
GTATCCTCAT TATTTGGTGA TGCGGTTAGC GCTATCGCAA TTGAAAAGTG CATGGAAAGC
GATGAGATGG TGTTCTCGCT AGGAACCGAT GGTGCCGGAG CGCCTTATCT TATTCAACCT
AAAGGGGGAG CGCTCTGTCC CGGTGAATCC CCTGAACTCT TTATGGATGG CATGCAGGTA
TTTGTGTTCA CCCTAAGGGA AGTTCCCTCT TCGATCACAG CCTGTTTAGC CGCTAAGGGC
TGGCAAAACG CTGATGTCGA TTATTGTGTA ATGCATCAAG CAAACGAAAT GATGCTAAAG
CGATTAGGAG ACAAGTTAGG TTTAACACAT GAACAGCTAG TTATATCTAT GGGGGAAGTC
GGTAATACCA GCTCTGCATC CATACCTTTG GCATTAGGGT TAAGTTTAAG TGAACCGCTG
CTAAAGGGAA GCGTAAACTT GGTATTGTCT GGATTTGGCG TTGGTTGGTC TTGGGGGACG
GTTGCTTTAA CACTAACCAA GCTTAAAGTT TGCCAGGTTA TAGATCTAAG TCTGGCTCAA
TAG
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| Protein sequence | MTITSVNKVS ITGIVSVLPE ISCENIDESS SSAREEMARI VASTGIRARR VASADQTALS
LGKVACESLI DAMDWKPEEI SLVVFVTQTP DYPLPGNAVQ LQHQLGLSKD TIAYDVNLGC
SGFVYGLWQV AQLVAGLSKG KALLVVGDTT THQYRQDNRA VSSLFGDAVS AIAIEKCMES
DEMVFSLGTD GAGAPYLIQP KGGALCPGES PELFMDGMQV FVFTLREVPS SITACLAAKG
WQNADVDYCV MHQANEMMLK RLGDKLGLTH EQLVISMGEV GNTSSASIPL ALGLSLSEPL
LKGSVNLVLS GFGVGWSWGT VALTLTKLKV CQVIDLSLAQ
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