Gene Shew_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1315 
Symbol 
ID4920488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1526949 
End bp1527521 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content55% 
IMG OID640162855 
Producthypothetical protein 
Protein accessionYP_001093443 
Protein GI127512246 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCCC TCCTACGCCA ACTGCTCCTT ATCAGCGCCG TGACCAGTGC CATGCTAAGT 
GCCCCTCTGG CCGCCAAGAC ACTGGCAGAT GTGTCCCTCG CCGATGAAAT AATCCTAAGC
GAACAAGCCT TGCAGCTCAA CGGCGCTGGC ATTCGCAGCA AGTTCTTTAT GGATCTCTAT
GTGGGCAGCC TATACACCCC AAGTCCGAGC CAAACGCTCG ACAGCGTACT CAACGCCCCT
AGGGTCGCGA TTCGCTTGAA TATCGTCTCA GGCATGATCA CCTCAGAGAA GATGCAAGAT
GCGATCATCG AAGGCTTCGA CGATGCCACA GACGGCAAAC CTCAGGCGAT TCAGCCCCAG
ATAGATGCCT TCATGGCCCT GTTCTCGGCG CCGATTGCCG AGGGGGATCA ATTTACCTTG
GAGGCAGTAA AAGAACTTGG CGTCACCGCC TATAAGAATG GCGAAAAGCA GGCCACGGTC
GAGGGTGAGA CCTTTCGCAA GGCGCTGCTG AAGATCTGGC TGGGCGACAA GCCGGCGCAG
AAGAGCCTCA AAAAAGCCAT GCTAGGTGAT TAA
 
Protein sequence
MKSLLRQLLL ISAVTSAMLS APLAAKTLAD VSLADEIILS EQALQLNGAG IRSKFFMDLY 
VGSLYTPSPS QTLDSVLNAP RVAIRLNIVS GMITSEKMQD AIIEGFDDAT DGKPQAIQPQ
IDAFMALFSA PIAEGDQFTL EAVKELGVTA YKNGEKQATV EGETFRKALL KIWLGDKPAQ
KSLKKAMLGD