Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1315 |
Symbol | |
ID | 4920488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1526949 |
End bp | 1527521 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640162855 |
Product | hypothetical protein |
Protein accession | YP_001093443 |
Protein GI | 127512246 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCCC TCCTACGCCA ACTGCTCCTT ATCAGCGCCG TGACCAGTGC CATGCTAAGT GCCCCTCTGG CCGCCAAGAC ACTGGCAGAT GTGTCCCTCG CCGATGAAAT AATCCTAAGC GAACAAGCCT TGCAGCTCAA CGGCGCTGGC ATTCGCAGCA AGTTCTTTAT GGATCTCTAT GTGGGCAGCC TATACACCCC AAGTCCGAGC CAAACGCTCG ACAGCGTACT CAACGCCCCT AGGGTCGCGA TTCGCTTGAA TATCGTCTCA GGCATGATCA CCTCAGAGAA GATGCAAGAT GCGATCATCG AAGGCTTCGA CGATGCCACA GACGGCAAAC CTCAGGCGAT TCAGCCCCAG ATAGATGCCT TCATGGCCCT GTTCTCGGCG CCGATTGCCG AGGGGGATCA ATTTACCTTG GAGGCAGTAA AAGAACTTGG CGTCACCGCC TATAAGAATG GCGAAAAGCA GGCCACGGTC GAGGGTGAGA CCTTTCGCAA GGCGCTGCTG AAGATCTGGC TGGGCGACAA GCCGGCGCAG AAGAGCCTCA AAAAAGCCAT GCTAGGTGAT TAA
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Protein sequence | MKSLLRQLLL ISAVTSAMLS APLAAKTLAD VSLADEIILS EQALQLNGAG IRSKFFMDLY VGSLYTPSPS QTLDSVLNAP RVAIRLNIVS GMITSEKMQD AIIEGFDDAT DGKPQAIQPQ IDAFMALFSA PIAEGDQFTL EAVKELGVTA YKNGEKQATV EGETFRKALL KIWLGDKPAQ KSLKKAMLGD
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