| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1314 |
|---|
| Symbol | |
|---|
| ID | 4920487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 1525895 |
|---|
| End bp | 1526809 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640162854 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001093442 |
|---|
| Protein GI | 127512245 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCAA GCCTATTATC TCGCAATACG ATCAACGCCC TGGTTTTAGG GTTAACCTGT
CTGACGGCCG TTTCCGCCCA GGCGGCACAA GGGGGAGCGC GACAGGCGTC GCCCTTAACC
CTGTCGGTAT CGCGTATCGG CGTCGGTGAG GCCGATGTGG GTGACAGCGG CCTGGCACTG
CAGCGCGACA CCTGGCTGTT CGGCGCCAAG ACCAGTTATG TCTTGAATCG TCAATGGTCG
CTAAGTGCCA GCATCAGTTA CGACAGGCTG GATTATGACT GGAGCGGCCG CGGCGCCTCA
CTGCTGGGTG GTAATCTGGC GCCCTGGTCC AATGTAGACA GGTATGGGGT TGGCCTGGGG
GTCAGCTTTC GTCCCAACAA TCGTTGGCTG TTCATGCTGG CGCCTAAGCT GCAGTACGCC
TATAGCGAGG GCACCTCATC TTCCAATGCC CAAAGTTATG GGGTGGTCGC CTCAGGCATG
TATCGCTTCA ATGGCGGCAA CATGCTGGGC CTAGGGGTCG CCTATCTTAA TGACATCTCT
GAGGTGAGAA CCTTGCCTTA TCTGGCAGTG AACTGGCAGA TAACCGATAA GCTTAAGCTT
GCCAATCCCT TTTCGGCGGG CTTTAGCGGC CCGGCGGGCC TGGAGCTGAG CTATCAGTGG
TATGACTCGC TGGATGTGGG TGTCGGCAGT TCGAAGCGCA CCCAGAGATT CTTGGTGAAA
GATGAAGATG TGACCCTGGA GATAGACGAG TGGGTTGGCT TTGTCAGGGC GGGCTGGCAG
GCGAGCGAGC CACTCAAATT TGATGCCTAT CTGGGCTATT TCTTCAGTGG TGAGATAGAG
CTCTCCTCGC CGAAAACCCA GGAGTCGCTA GAGAATCAGC TGGCACTGGC GTTTTCCGCC
CAATATCGAT TCTAG
|
|---|
| Protein sequence | MKPSLLSRNT INALVLGLTC LTAVSAQAAQ GGARQASPLT LSVSRIGVGE ADVGDSGLAL
QRDTWLFGAK TSYVLNRQWS LSASISYDRL DYDWSGRGAS LLGGNLAPWS NVDRYGVGLG
VSFRPNNRWL FMLAPKLQYA YSEGTSSSNA QSYGVVASGM YRFNGGNMLG LGVAYLNDIS
EVRTLPYLAV NWQITDKLKL ANPFSAGFSG PAGLELSYQW YDSLDVGVGS SKRTQRFLVK
DEDVTLEIDE WVGFVRAGWQ ASEPLKFDAY LGYFFSGEIE LSSPKTQESL ENQLALAFSA
QYRF
|
|---|
| |