| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1306 |
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| Symbol | |
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| ID | 4920459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1513910 |
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| End bp | 1514731 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640162847 |
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| Product | CMP/dCMP deaminase, zinc-binding |
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| Protein accession | YP_001093435 |
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| Protein GI | 127512238 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGGAA AATTACCAGC CTTATATATG AAGCAAGCTG TTGACCAGAT GAGAATGTCT
GAGGGAAAAG GACCGAAGGT TGGTGCGGTT ATAGTTACAA AAGGTCACCA AGTTATAGCT
GGACATAAGA AAAATGGCAC TCATGCAGAA CGAGCTGCAA TTGAAGAGGC TCAAGAGAAA
AAAATTGATT TACGTGGCGC GACTTTATAT TCAACTCTAG AACCTTGTGT GTCAGTTGGC
TCAAAAAAGG AAGCTTGTTC AGATCTAATA TCACGAGTTG GTATTAAGAC TGTATATATT
GGTCGATATG ACCCTAATCC AAATATTCAA CGCCTTGGTT GGAAGAAACT TAGAGATGAA
GGTATCTCGC TGCATGACTT TGATATTGAG TTTAGAAACG AAATTGATGA AATAAATCAA
ACTTTCATGG AGCACTTTGT CTCAGGCACT GGTCCTACAG GTGGTGCGAG ATTCGATTAT
CAATTAAATG GAGGGGAGTT TGAAATTCAG TTCTCTGAGG ATGATGAAAG AAGTATTATC
ACTCAGTGGA CCAATCGGGG AAAAGATTCC ATCTACGCTT ATGCAGTAAA GCCTGTTGAG
GTTGCAATTG CACGATATGC TACCGAGTTT TCTGAAATAG ATGATCCTTT AGCTTATGAC
TTTACATACA CCGTTCCTGT TAGTGTTGGC GAGATCGCAA TTTTTGTATC TAATGACGGC
GCAGTGTTGG TAAAGGTTCT AGAGGTAGAG TCTGATCCTG CAAAGACAAC GTCGCAAAAG
TACGTAAAAA TTAAATATGA AGTTCGACCG AAGAGCGCCT AA
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| Protein sequence | MTGKLPALYM KQAVDQMRMS EGKGPKVGAV IVTKGHQVIA GHKKNGTHAE RAAIEEAQEK
KIDLRGATLY STLEPCVSVG SKKEACSDLI SRVGIKTVYI GRYDPNPNIQ RLGWKKLRDE
GISLHDFDIE FRNEIDEINQ TFMEHFVSGT GPTGGARFDY QLNGGEFEIQ FSEDDERSII
TQWTNRGKDS IYAYAVKPVE VAIARYATEF SEIDDPLAYD FTYTVPVSVG EIAIFVSNDG
AVLVKVLEVE SDPAKTTSQK YVKIKYEVRP KSA
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