Gene Shew_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1304 
Symbol 
ID4920450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1512213 
End bp1512329 
Gene Length117 bp 
Protein Length38 aa 
Translation table11 
GC content39% 
IMG OID640162845 
Productcyd operon protein YbgT 
Protein accessionYP_001093433 
Protein GI127512236 
COG category[S] Function unknown 
COG ID[COG4890] Predicted outer membrane lipoprotein 
TIGRFAM ID[TIGR02106] cyd operon protein YbgT 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0821564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTATT TTGCTTGGAT ATTAGGCATT TTGCTGGCGT GTTCTTTCGG TATCATCAAC 
GCCTTGTGGT TAGAGAATAC TGAGAACATG GATAGGGATT CAGAGCTTAA AGATTAA
 
Protein sequence
MWYFAWILGI LLACSFGIIN ALWLENTENM DRDSELKD