| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1303 |
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| Symbol | |
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| ID | 4920444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1511059 |
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| End bp | 1512198 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162844 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_001093432 |
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| Protein GI | 127512235 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.117211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGATT ATGAAATATT AAGATTTGTC TGGTGGGCGC TGATTGGTGT GCTGTTCATC
GGATTCGCCG TCACCGACGG TTTCGACATG GGCGTGGGTG CCTTGCTGCC TATCATAGGT
AAGGATGATA CCGAACGTCG TATTATGATC AACTCGATTG CCCCCCACTG GGATGGCAAC
CAGGTATGGT TAATCACCGC CGGTGGCGCC CTGTTTGCCG CCTGGCCTAT GGTATACGCG
GTCTCCTTCT CTGGCTTCTA TGTGGCCATG ATGTTGGTGC TGTTTGCCCT GTTCCTGCGC
CCCGTGGGCT TCGATTACCG CTCTAAGATC GAAGATCCAA GATGGCGTAA GGCTTGGGAC
TGGGCGCTGT TTGTGGGTGG CTTCGTACCG CCGCTCATCA TAGGCGTCGC CTTTGGTAAC
CTGCTGCAAG GTGTACCGTT TAACTTCGAC GAGTACCTGC GCGCAACCTA CCACGGTGGT
CTGTTTGGCC TGCTCAATCC ATTTGGCCTG CTGGCCGGTC TGGTGAGCGT GTCTATGATC
ATCATGCAAG GCGCTTCTTG GCTACAGATG AAGACAGAAG GCGAGCTGCG CGTACGTGCG
GCGACGGCTA CCCAGGTGGC TGCGGCCTTG GTTGCTGTGC TCTTCACCCT GGCCGGTGTA
TGGCTAGCCA ATGGTATCGA CGGTTATGTT GTAACCTCGA CTATCGACAC CCACGGCGCA
TCTAACCCAG CCCTTAAGAC GGTTGCGGTA GAGGCGGGTG CCTGGCTGGC TAACTACGAC
AAGTACCCAG TGACCATGCT GTTCCCAATC CTGGGTATCG CCATGCCTGT ACTGGCGCTG
CTGGCGAGTC GTTTCAACCG CTCTGGTTTT GCCTTCCTGT TCAGCTCACT GGCGGTGGCT
ATGGTGATTC TGACTTGCGG CGCGGCCATG TTCCCGTTCG TGATGCCATC ATCACTTGAG
CCAAACGTGA GCCTGACCAT GTGGGATGCC ACAGCGAGCC ACATGACACT GACTGTGATG
ACCTGGGCGG CCGCGATTTT CGTGCCTATC GTGCTAAGCT ACACCATCTG GACTTACTTC
AAGATGTTTG GTCGCTTGAG CCGTAGCTAC ATCGAAGACA ACAAGACGTC ACTTTACTAA
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| Protein sequence | MFDYEILRFV WWALIGVLFI GFAVTDGFDM GVGALLPIIG KDDTERRIMI NSIAPHWDGN
QVWLITAGGA LFAAWPMVYA VSFSGFYVAM MLVLFALFLR PVGFDYRSKI EDPRWRKAWD
WALFVGGFVP PLIIGVAFGN LLQGVPFNFD EYLRATYHGG LFGLLNPFGL LAGLVSVSMI
IMQGASWLQM KTEGELRVRA ATATQVAAAL VAVLFTLAGV WLANGIDGYV VTSTIDTHGA
SNPALKTVAV EAGAWLANYD KYPVTMLFPI LGIAMPVLAL LASRFNRSGF AFLFSSLAVA
MVILTCGAAM FPFVMPSSLE PNVSLTMWDA TASHMTLTVM TWAAAIFVPI VLSYTIWTYF
KMFGRLSRSY IEDNKTSLY
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