| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1299 |
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| Symbol | |
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| ID | 4920429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1501837 |
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| End bp | 1502373 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640162840 |
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| Product | CMP/dCMP deaminase, zinc-binding |
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| Protein accession | YP_001093428 |
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| Protein GI | 127512231 |
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| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0590] Cytosine/adenosine deaminases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00201602 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACC CGATAGAGAA GCAAACCAGC CTGGATGAGC AGGCGGTAAA AGATGAAGCC
TATATGCGCC AAGCCATGGC GCTGGCCGCC CAGGCCGAGT TGCGGGGCGA GGTGCCGGTG
GGCGCGCTGT TGGTGAAAGA TGATAGTGTG ATAGCGACCG GCTACAACCT CAGTATCTGC
CGCCATGACG CCAGTGCCCA CGCTGAGATG GAGTGCATTC GCGCCGCGGG CCAGGTGATG
GAAAACTATC GTTTGCTGGA TACCACCCTC TACGTGACCC TAGAGCCCTG CGCCATGTGC
GCCGGCGCCA TGGTGCATGC CAGAATTGGT CGATTGGTGT TTGGCGCCGC GGATCTCAAG
ACGGGCGCGG CCGGTAGCGT GGTGGATCTG GTGCGCAGCA GCGCCTTCAA TCATCAGCTG
GAGGTGACCG CTGGGGTGTT GGCCGAGGAT TGCGGCGAGC AGCTCAGCGC CTTCTTTCGC
CGGCGGCGTC AGGAGAAGAA GGCGTTGAAG ATGGCAGAAA AAAAACAAGG GCAATAG
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| Protein sequence | MSNPIEKQTS LDEQAVKDEA YMRQAMALAA QAELRGEVPV GALLVKDDSV IATGYNLSIC
RHDASAHAEM ECIRAAGQVM ENYRLLDTTL YVTLEPCAMC AGAMVHARIG RLVFGAADLK
TGAAGSVVDL VRSSAFNHQL EVTAGVLAED CGEQLSAFFR RRRQEKKALK MAEKKQGQ
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