| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1285 |
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| Symbol | |
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| ID | 4920532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1484046 |
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| End bp | 1485806 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162826 |
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| Product | 5'-nucleotidase |
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| Protein accession | YP_001093414 |
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| Protein GI | 127512217 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.64405 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACA GATATTCGCT CAAGCTTGCA CACATCAACG ACACCCACTC TCACTTCGAT
CCTTCACGCG TTCAATTTCT GCTCACCCAT GAGCAACAAA GTTATGAGGT CTATAGCCAT
AGCGGTGGCT ATGCCAGGAT CGGCTATCAG GTGCAGCAAG CGCGTCAGCA AGCGGCAGAT
GCCGGGCAAG ATTTTCTGTT TCTGCATGGG GGCGACAGCT TTCAGGGCAC TCTCTACTTC
AATCAGTTTA AGGGCGTCGC CAACGCCGAT CTGCTCAATC GCCTCGCCCC AGATGCCATG
GTGCTGGGTA ACCATGAGAT AGACGCTGGC AATCAACCGG TTAAACGGTT TCTCGATACC
ATTAACTTCC CTCTGCTCGC CGGCAACATG GATCTCAGCC AGGAAGATCC CCTAAAGCAG
GACAGACTCG CCGGCCACCC CAAGCTATTT GACTATATTC CCGAGCGCCA GATGGCCAAG
GTGCTGCTAA AACCCCTTGG CGACAAGCAG ATAGCCATCA TAGGGATCAC CCTGGATCAG
ATGAAAGAGA TCGCCAGGCC AGATGAAGAT ACCCACTTTG CCAACGCCAT CGCGACCACA
ACCAATACGG TGGCCAAACT CAAGGCCGAC GGCATAGATC ATATCCTGGT GCTGAGTCAT
CTAGGTTGGG ATAAGGATAA AGAATTAGCC AGAGAAGTCC CTGGCATCAG TCTGATCGTC
GGTGGTCACT CACATACCCT ACAGGGCGAT TTCAGCGCTA TCGGCATCAA CGCCCTGCCC
TATGGCTATC GCGTGGAAGA CACGCCTATT TTGCATGCAG GCAAGTACGC CGAAACCCTG
GGGCTATGCG ACATCGAATT TGACGACAAG GGGCGTGTTA CAAAGCTTGC CGGACACAAC
TACTTCATGC TCGATGAGCA TCTGATCATC GAAGGGGAGC AAGAGGTCAC CGCCGCTACC
TACAATGCGC TGAAGCTGCA GCTCATGGCG CATCCAGGCG TGCTGTGGAA TGAAGGGTTA
TGGGATGAAG AGCTAAGCGA GATCAATCAG GTGATCGCCC AGCGCTATCG TCCCGCCATC
GACGCGCTGG AACATCAGGT GCTGGGGTTT GTGCCGAAAA ACTTGATCCA CACCCGCCTG
CCCAGCAAGG CACTGCCCCA CGGCAGCGAG ATCGCCCCCT GGGTCTGCAA GAGCATCTAT
CATGAGACCC GCAGACTCGA TCTTCAGGTG GACTTTGCCC TGCACAATGC CGGCGGCGTC
AGACAGTCCC TCAACAAGGG CACAGTGACC ATGGCCGACG TGCTGGGACG CCTGCTGCCC
TTCGCCCTCC CCCTGGTGAA ATACCGCATC TTGGGCCGCT ACCTATATCA GACCCTGGAG
TCGGCCATCA ACTCGGCCAC CAACAACAGC ATTACCGGCA CGGGCGCCGG CAGCTTCCCC
TACACCTATG GCCTCAAATA TTGTTATGAC GGCAGGCAGC CGCTGGGCAC CCGCATTCTA
CACCTGGAGA TCTTGACCGA AATCGCCGGC GAGATGCAGT GGCACAGTGT GATGCCAGAC
CGCATGTATA GCGGCGTCTC CTCGGCCTAT ACAGCGTCGG GCAAGGAAGG CTATCAGGAT
CTGCTCAGAG CCGAGCAACA GGAATCGATT GAGGCGCTCA CCCTGCCCCA GGCCTTCATC
CGCTACATGC AGCGCGAAGA GGGGCTCCAC GGCATCATGC CGCCCCATGT GTTGTATACC
AGTCACCTGG ATGGCCTGTA G
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| Protein sequence | MTNRYSLKLA HINDTHSHFD PSRVQFLLTH EQQSYEVYSH SGGYARIGYQ VQQARQQAAD
AGQDFLFLHG GDSFQGTLYF NQFKGVANAD LLNRLAPDAM VLGNHEIDAG NQPVKRFLDT
INFPLLAGNM DLSQEDPLKQ DRLAGHPKLF DYIPERQMAK VLLKPLGDKQ IAIIGITLDQ
MKEIARPDED THFANAIATT TNTVAKLKAD GIDHILVLSH LGWDKDKELA REVPGISLIV
GGHSHTLQGD FSAIGINALP YGYRVEDTPI LHAGKYAETL GLCDIEFDDK GRVTKLAGHN
YFMLDEHLII EGEQEVTAAT YNALKLQLMA HPGVLWNEGL WDEELSEINQ VIAQRYRPAI
DALEHQVLGF VPKNLIHTRL PSKALPHGSE IAPWVCKSIY HETRRLDLQV DFALHNAGGV
RQSLNKGTVT MADVLGRLLP FALPLVKYRI LGRYLYQTLE SAINSATNNS ITGTGAGSFP
YTYGLKYCYD GRQPLGTRIL HLEILTEIAG EMQWHSVMPD RMYSGVSSAY TASGKEGYQD
LLRAEQQESI EALTLPQAFI RYMQREEGLH GIMPPHVLYT SHLDGL
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