Gene Shew_1281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1281 
Symbol 
ID4920470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1481125 
End bp1481868 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content51% 
IMG OID640162822 
Producthypothetical protein 
Protein accessionYP_001093410 
Protein GI127512213 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.400451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATTT TAGTTGGCGG TGAAAAAGGC GGTAGCGGAA AGAGCTGTTT AGCCCAAAAC 
ATAGCGGTAT TTCTCACGGT AGAATGCGGC GCGTCGGTCA TCATGGTCGA TTGTGATCCC
CAGCGGACCA CCTCAGACTG GATTCAAGCT CGTAACAACA ATGGCACCCT GGCCAGCATC
AACTGCGTAC AGCTCTACGG CAAGATACGC AACGATCTGC TCAGCCTGGA GCAACACTAT
GACTATGTCA TCGTCGACTG TGGCGGTCAG GATAACCTGG CACTGCGCGC CACCATGTCG
GTTGCCTCCC ATGTGTTGAT GCCACTGCGT CCTAAGCGCA GAGACTTGAA AACCGTCAGC
CACATGGATG ATATCGTCGC TACCTGTATG ATGATTAACC CTAAGATGCG CGCATCTTTC
GTGATCACTC AATGCCCTAG CCTACCAAAC CAGGCTAACC GCATCTTTGA GGCGAAAGAG
GTGTGTAAGA CTTACGACAT CAACGTGCTT GACGCCATCA CCTACAGCCG AAACATTTAT
GATGACAGCG AAGAATCGGG TCTGTCTGTC ATGGAAACTC AGCCAAAAGG CAAGGCCGCC
GAGGAGATAC GCAGCATAGC CTGTGAAATG CTGCAAGCTT CGAGTGCTAC AGAAATTCGC
AATCGTCTTG CCGAAAAACA GATGGATAAG TTAAGGGGTA ACTATGGGTC TGGCCGATCT
CAAGAAAAGC TCTACGCAGT CTAG
 
Protein sequence
MIILVGGEKG GSGKSCLAQN IAVFLTVECG ASVIMVDCDP QRTTSDWIQA RNNNGTLASI 
NCVQLYGKIR NDLLSLEQHY DYVIVDCGGQ DNLALRATMS VASHVLMPLR PKRRDLKTVS
HMDDIVATCM MINPKMRASF VITQCPSLPN QANRIFEAKE VCKTYDINVL DAITYSRNIY
DDSEESGLSV METQPKGKAA EEIRSIACEM LQASSATEIR NRLAEKQMDK LRGNYGSGRS
QEKLYAV