| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1264 |
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| Symbol | |
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| ID | 4920571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1461981 |
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| End bp | 1464017 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640162804 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001093393 |
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| Protein GI | 127512196 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.145211 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAA GACTGACGTG GGAACAAACG CGTGTTGTTC GTCATGACGC GGGACATGCT
TTGATTAAGG CTGTGCCGGG CAGTGGAAAA ACGACCACTC TGGTTAAGCG TGTAGAGCGG
TTGATTAAAA CAGGAGTAGA ACCAGGTTCC ATTCTAATCC TGATGTACAA CAAATCGGCA
ACTGTGAGCT TCAGCGATAA GTTAAAGCTG GCCTTGAAGT CGGATGCTAT TCCCGAGGTA
CGTACATTTC ACAGCCTTGC CTTGAAGATA GTGGCATTGG CAGAGCGCCA ACAACTTACA
CCCAAGAAAA TGTTAATAAC GCCGGGTAAT TATCGTTATG ACGAGCTGGT TAAACAGGCT
TACCGTGTCG GGTGCAGTTA CGACTCTGGT TATATTGAAC AGAGTGATAT AACGGATTTT
GAAACATTTG TTTCTCGATG CCGTGCATCC GCTGTGACAC CAGCCGATGC GGCCGCAGAT
CCTACGTTCA GTAAGATCAA GCCAGAGTTT ATTCGGGCAT ATGGATGTTA CTGTGAGCTG
CTGGAAGCGA ATGGCCTGAG AACATTCGAA GACAGCATGA TTGAAGCTGT TTCTCTGTTA
AGGATCTATC CCGGCCTTGT AGCCCGATTC AAACACATCA TCGTAGATGA ATACCAGGAC
GTCAATCTCG TACAGCATGA GATGATCCGC TTACTCACCA AACCTGACAC ATCGGTGATG
GTAGTCGGGG ATCTCAATCA GTGCATTTAC GAATGGCGGG GGGCGCAGCC TGACTTTATG
GACGGTTTGT TTGAGCAACA ATTTCCCAAT ACCACTGTGT TTCAGCTTTC GTGTACATTC
CGATTTGGTC ATGAACTTTC GCTGATTGCT AATTCTGTTA TTCGGCGTAA CTCTAGCAAG
TTGACCAGGT TGTGCGTAAG CCATCCATCT ACGCCTAAAA CAGAAGTCAA GCTGCATTTG
GATAACTGTT TATCCGAGGT GTTATCAGCA ATAGCTACTG AGAATGGTTC ACAAGCGATA
CTCTCCCGTT CAAATGCAAG ATTGACTGAG GTTGAGTTGG TATTACGCCT GTGTGGGCGC
ACATATCGCT ATCTGAACGG TTCATCGTCT CTCTATAGCC GCTCTGAAAT AGGGTTACTA
GTGGTAGGTG TGCTGCTATG TGTTTATGGC GACCTAAGAC TAATAGAGAA TCACCCGTGT
AAACGGGAAA TGCTCTACGG GTTTCTGAGG GAGGCCGGAA TCCGATGGCA GAAAGGTCAG
GTTAAAGAGG CTCTTGATGC CCTGATGACA CAGGTGGATG TGTTTTCGGT ATTAGGGAGA
CTATTCGAGA ATTCCCCACA TCAGAGGGAA CGCCTGGAGC GACTCGCCTC GGTTCGCAAT
AAAGACGATG ATAGCGTGCT GGCGTCGAAT GTATTACAGC ACTTGAGTCT GGCAGGATTT
ATTGAAGGTG TCGGCTCGGA TAGCGTGAGA CGCACTGCAT CAAATGATCG TCTGCGGGGT
GTTGATCGGA TTGAAGAGCT ACTGATATCA AATCCAATTG ATGCTCGAAC ATTTTTGAAT
CTTATTCTGC ATCCGCAAGA CATATCCGCA GACAGTGAGC CTATCACGCT TGCTACCATA
CATGGTTCTA AGGGCCTTGA GTGGGACCAC GTCATATTGA TTGGGCTTAA TGATTGCGAA
TTTCCTGGAG GTAAGCCTGA TAGTGGCACT CAATTACCTG CGCTAACGTC TGAATCGATT
TCTAACGAAG AACTAGAAGT GGAGCGGCGG TTGTTTTACG TAGGGATTAC TCGTGCAAAG
CACCAATTGC ATTTGGTTGC GCCACTAGAT GAAAGCCTCA CTTGGTGGCT TAAAAAACGC
TGGGATAGCA CTCCGAAAAA GGTGCCTGTA GCGACTCGAT TCATCTATGA AGCAGGGTTA
ACTGCTTGTT CTCTAACGAG CCAATCCATT TATGCCGGAT TGTTAGAACA GCAAACGACT
GAATTTAGCA AGTTTCACCA ATGGTATCTG AAGGATCTTC AAAGGCTAAG AGTTTAG
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| Protein sequence | MTKRLTWEQT RVVRHDAGHA LIKAVPGSGK TTTLVKRVER LIKTGVEPGS ILILMYNKSA
TVSFSDKLKL ALKSDAIPEV RTFHSLALKI VALAERQQLT PKKMLITPGN YRYDELVKQA
YRVGCSYDSG YIEQSDITDF ETFVSRCRAS AVTPADAAAD PTFSKIKPEF IRAYGCYCEL
LEANGLRTFE DSMIEAVSLL RIYPGLVARF KHIIVDEYQD VNLVQHEMIR LLTKPDTSVM
VVGDLNQCIY EWRGAQPDFM DGLFEQQFPN TTVFQLSCTF RFGHELSLIA NSVIRRNSSK
LTRLCVSHPS TPKTEVKLHL DNCLSEVLSA IATENGSQAI LSRSNARLTE VELVLRLCGR
TYRYLNGSSS LYSRSEIGLL VVGVLLCVYG DLRLIENHPC KREMLYGFLR EAGIRWQKGQ
VKEALDALMT QVDVFSVLGR LFENSPHQRE RLERLASVRN KDDDSVLASN VLQHLSLAGF
IEGVGSDSVR RTASNDRLRG VDRIEELLIS NPIDARTFLN LILHPQDISA DSEPITLATI
HGSKGLEWDH VILIGLNDCE FPGGKPDSGT QLPALTSESI SNEELEVERR LFYVGITRAK
HQLHLVAPLD ESLTWWLKKR WDSTPKKVPV ATRFIYEAGL TACSLTSQSI YAGLLEQQTT
EFSKFHQWYL KDLQRLRV
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