| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1263 |
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| Symbol | |
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| ID | 4920747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1461001 |
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| End bp | 1461984 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640162803 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093392 |
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| Protein GI | 127512195 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.118397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGACAA CTCCAACCAT ACAGTACGCT TATGCATTGG ATTGCAAGGG AAGTCTAACC
CATATCAGTG ATGCACAGCG TTCAAATAGC TACACTTGTC CAGGCTGCAA ATGTCCTCTG
ACGGCGGTTT TGGGGGAATT CAACGCCAAG CATTTTCGGC ATTTTGAAGA GTGCTGTGCG
CTTGAGACCT ACTTGCACAA ATGCGCAAAA GAGGCATTTT ACCTACGTTA TCAACAAGCT
CTTTCTACTG AGACAGCCAT CAGCCTGGAA CTGGAGCGTG AGGTTTCCTG CTATGGCGCT
CGTTTAGGTC TACTGGGCAG CGCAACGGCT AGGTGTTCGA AAACCAAGTC TGCACGTTAC
AATTTAACGC AGTTTTTTAA CTGTGCAGAG CTTGAGAAGC GCGATGACGT TACAGGGCTA
CAACCGGATG TGATGCTATG CGATTTGCAG GGCAATAGGC GTTGTTATGT AGAGATTTGC
GTAACGCATC CATGCTCCGA GGAAAAGATT GCTAGTTGCG TCCCAATTTT GGAGTTTAAG
GTTGAATCTG AAGCAGACAT CCAAATGTTG CTTACGGGGC AATACTCTAT CAAAGATGAG
CGACTCAATG TTTTTAATTG GCAACCACCG CCACAAACAG TTGATCACTG CGTCGGGTAT
TGCTCAGTTG GCAATGTAGA AATGTCTGTT TGGAGTTTAA GCGATTCTGG CAGACTAAAT
GAGAGAGTCA TGCCACTAGA CCAAGTGGAC TTGTTGACCA GCTCAACATT GAATACATGG
CCCCGCTCGC TTGAGCCAGT TGAGGTGGCA GATAGATTAA AAACCTTTTT ACGTCATGCT
GAACCTAGTT CGCGACTTCC AAATTGCCTT TTATGCGCGC ATTCGATGCA ATGGGACAGT
GGCTTTGTAC AGTGTCGCAG TAAAGGTAAA CAGGTTGCGT ATACTGAAGC TCGTCAGTGC
GCCAAATATC AGGTTGCAGT ATGA
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| Protein sequence | MMTTPTIQYA YALDCKGSLT HISDAQRSNS YTCPGCKCPL TAVLGEFNAK HFRHFEECCA
LETYLHKCAK EAFYLRYQQA LSTETAISLE LEREVSCYGA RLGLLGSATA RCSKTKSARY
NLTQFFNCAE LEKRDDVTGL QPDVMLCDLQ GNRRCYVEIC VTHPCSEEKI ASCVPILEFK
VESEADIQML LTGQYSIKDE RLNVFNWQPP PQTVDHCVGY CSVGNVEMSV WSLSDSGRLN
ERVMPLDQVD LLTSSTLNTW PRSLEPVEVA DRLKTFLRHA EPSSRLPNCL LCAHSMQWDS
GFVQCRSKGK QVAYTEARQC AKYQVAV
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