| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1260 |
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| Symbol | |
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| ID | 4920584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1455597 |
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| End bp | 1457756 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640162800 |
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| Product | DNA methylase N-4/N-6 domain-containing protein |
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| Protein accession | YP_001093389 |
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| Protein GI | 127512192 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2189] Adenine specific DNA methylase Mod |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.481233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.398811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTCGAC TAACTGATCT ACTCGCCAAG GCCAAGGCCA AAGATTCACA GCTGGGTGCC
GATTTGGAAC GCGAATTTAA GGTGCTTTCC TCCCGGTTGT CGTTTGGTCT TAATTTTGAA
CGTCACAGCC CGGAAGCTGT GGAGTTGCCT TTGCGCTCTA TTCGTAAGGG GGACAAGGTC
CGCGTGTTGC CTGAGCGTGG CTCGGCCAAA AAAGGTGATC AGCGCCTGTG GCAGGTCAAG
GCCATTCACA AGGCCCAAAA TATCGCCGAC CTGGAACTAC TGGATACAGC AGAGCCAGAA
ATGCAATCGG CGCCGCTGAG CGAGCTTATC GTTGTTGCTG AATTCCGCGA CACTATTTAT
CCGGGCCTGG TTAGTACAGG CAAGGTGACC CGTGGCGGCG ACAAGCCTTT TCATTCAGTC
ATTAATGGCG AGAACTACCA CGTTCTGAAG GCGCTGACTT ATACACACAG AGGCAAGATT
GACGCTATCT ACATTGACCC GCCCTATAAC TCTGGGGCCA AGGACTGGAA ATATAACAAC
GATTACGTTG AAGGTGACGA CCTATATAGA CACAGCAAGT GGCTAGCAAT GATGGAGCGG
CGTTTATTTG TCGCAAAGGA ACTACTCAAC CCAGCGGACT CGGTACTAAT AGTCACTATT
GATGAAAAGG AATACCTTAG ATTGGGCTTA CTGCTTGAGC AGGTTTTTCC CGAAGCAAAG
ATTCAAATGG TTTCTTCTGT AATCAATCCT TTCGGTGTTG CACGGGCCGG TCAGTTCGCA
CGCGTCGACG AGTACATTTT CATTGTCAAC TTCGGACAGT CAGTACCAGT CCAAACTCCC
ATCCAGACTC TGCAAGTGGG TGATTCTATG CAAGTAAACG GTGACGAAGA CTTGGCAGAA
CAAGCAGGTG AGAACTTAAA AAAAGTTGAT AAAACAACAT ATTGGTTTTC ATTCATGCGT
GCGGGAAGTA ACTCTAGCCG AAGTCACTCG CCGGGATGTT TTTATCCGAT ATTTGTATCT
AAAGATGGCG CGATTAAAGC GATTGGTCAT CCATTGCCAA AAGGCGAAAG CAAGGATAAC
GTCAAAACTC CTGCGGGCAC TTATGCCGCT TGGCCAGTTA ATGAAGCTGG AGGTGAAGCT
GTATGGCAAG CAAGTCATGA AAATGCAAAA CAACTCTTGG CCTCTGGTTA TATTAGGTCT
GGCAGATTCA ACAAAAAACT CGGTCGCCAC AGCATCACTT ACCTTAGAGA GGGCACAGTA
GAAGCAATTG CTAATGGACT TCTGACTATC GCAGATGGTG AAATCAACAG AGTGGTTGAA
CAGACCCGAA CCTATGTTGG CAAGTCAACT TGGAATATCC GCTCACATAA TGCCACTAGT
CAAGGAACCA AGTTGCTTGG TCGCATTCTT CCTCGAAGAA AATTTCCGTA TCCAAAGTCA
CTATACGCGG TTGAAGATGC GTTGCGCTTC TTTGTAAGTG ACAAACCCGA CGCCATCATT
CTCGATTTCT TCTCCGGCTC TGGTACCACT GCTCACGCCG TGATGCGGCT GAATAGGCAA
GATGGTGGTC GTCGGCAGTG CATCTCAGTC ACCAACAACG AAGTGGCTGC TGATGAGCAG
AAAGCACTGC GTGAGCAGGG TTTGCGCCCC GGTGATGCTG AATGGGAAAA GTACGGTATC
TGCGACTACA TCACCAAACC CCGAGTGGCC GCTGCTATTA CCGGCAAGAC GCCAAGTGGA
GATCCGATCA AGGGCGATTA CAAGTTCACC GATGAATTTC CGATGGCTGA TGGCTTTGAG
GAGAACGCAG AATTTTTTAC GCAGACTTAT GAGGCCAAGA ACGCTGTTAA TCACAACCTG
GCCTATGCCC GCATCGCGCC TTTGCTATGG CTGCGAGCCG GTGCAAAGGG TAGTCGCATC
GACGAACTCC CTGTCGAGGG CTGGGCTGTG GCTGATACCT ATGGGTTGTT AAACGAGGTT
GATGAGGCCA CACCGTTCAT CGATGCCGTT GGTGCTGTTA ACGGTTTGCG GATTGCGTAC
ATCGTTACCG ACGATGACCG GCGCTTTCAG GCGATTGCCA AACGCCTACC TGAAGGCGTA
GAGCCTGTGC GCCTCTACGA ATCCTACCTG TCCAATTTCA GCTTTGCGAA CGGGGAATAA
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| Protein sequence | MSRLTDLLAK AKAKDSQLGA DLEREFKVLS SRLSFGLNFE RHSPEAVELP LRSIRKGDKV
RVLPERGSAK KGDQRLWQVK AIHKAQNIAD LELLDTAEPE MQSAPLSELI VVAEFRDTIY
PGLVSTGKVT RGGDKPFHSV INGENYHVLK ALTYTHRGKI DAIYIDPPYN SGAKDWKYNN
DYVEGDDLYR HSKWLAMMER RLFVAKELLN PADSVLIVTI DEKEYLRLGL LLEQVFPEAK
IQMVSSVINP FGVARAGQFA RVDEYIFIVN FGQSVPVQTP IQTLQVGDSM QVNGDEDLAE
QAGENLKKVD KTTYWFSFMR AGSNSSRSHS PGCFYPIFVS KDGAIKAIGH PLPKGESKDN
VKTPAGTYAA WPVNEAGGEA VWQASHENAK QLLASGYIRS GRFNKKLGRH SITYLREGTV
EAIANGLLTI ADGEINRVVE QTRTYVGKST WNIRSHNATS QGTKLLGRIL PRRKFPYPKS
LYAVEDALRF FVSDKPDAII LDFFSGSGTT AHAVMRLNRQ DGGRRQCISV TNNEVAADEQ
KALREQGLRP GDAEWEKYGI CDYITKPRVA AAITGKTPSG DPIKGDYKFT DEFPMADGFE
ENAEFFTQTY EAKNAVNHNL AYARIAPLLW LRAGAKGSRI DELPVEGWAV ADTYGLLNEV
DEATPFIDAV GAVNGLRIAY IVTDDDRRFQ AIAKRLPEGV EPVRLYESYL SNFSFANGE
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