Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1257 |
Symbol | |
ID | 4923525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1453953 |
End bp | 1454426 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640162797 |
Product | DNA repair protein RadC |
Protein accession | YP_001093386 |
Protein GI | 127512189 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.502332 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAAAG TGATCACCCT ACCCAGCAAC AGCTGGTCAC AAACTTCATC GCAAATCCTC GAAACTGCAG CAGGCATAGT GGCTGAGCGT TTCGTTCGTG GTGATGCCTT TTGTAACCCC GATGCCACCC GCGACTTTCT GCGCTTTAAG CTCCACCAGC ACCAACGTGA AGTATTTGGC GTGATGATGC TGGATAGCCA GCATCGGCTA ATAGAATTCA ATGAGATGTT TTTCGGCACA ATTGATGCCG CCAACGTCTA CCCCAGGGAG GTCGTTAAGG CGGTACTGCT ATGTAATGCC GCTGCGGTGA TCTTGGCCCA TAACCATCCT TCAGGCTGTG CAGAGCCATC AGCGGCCGAC AGGCGTATCA CCGAGCGGTT AATCAACGCT CTCAGTACCA TAGATGTGCC AGTGCTGGAC CACATTGTGG TGGGCGACCA ATGTGTGTCG TTTGCGGAGC GCGGTTGGCT CTAA
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Protein sequence | MHKVITLPSN SWSQTSSQIL ETAAGIVAER FVRGDAFCNP DATRDFLRFK LHQHQREVFG VMMLDSQHRL IEFNEMFFGT IDAANVYPRE VVKAVLLCNA AAVILAHNHP SGCAEPSAAD RRITERLINA LSTIDVPVLD HIVVGDQCVS FAERGWL
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