| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1249 |
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| Symbol | |
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| ID | 4923555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1446672 |
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| End bp | 1447769 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162789 |
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| Product | phosphoribosylaminoimidazole carboxylase, ATPase subunit |
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| Protein accession | YP_001093378 |
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| Protein GI | 127512181 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
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| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATCG GCATTATCGG TTGTGGTCAG CTGGCGCGCA TGATGGCGCT GGCGGGCATT
CCATTAGGGC TGAAATTTAG CTTCGTCGCC GATGGTGGCC CTGATACGGA TCTCAGCTGT
GTCGAGGGGC TCGGCCCTGT GGCGCCCTGG CAGCCGGGCC AGAGTGTCAG CGCACTCTAT
GAAGCCTTGG GAAAACCAGA GGTGATCACG GTCGAAAAAG AACAGGTAGA TCTCGAGCTT
GTTCGCGCCC TCGAAGCCCA CTGCATCATT AGACCGAATG TCGATAGCAT CGCCAAGTGC
AAGAGCCGTA TTCACGAGAA GCAGCTATTA GCCGAGCTTG GTATTCCCTG CGCGCCCTTT
ACCTATGATG TCAGCCTCGA GGAGAGCGCC AAGACCTTAG ATTATCCTAT GGTGATCAAG
TCCCTCGATG AAGGCTATGA CGGTAAGAAC CAATGGGTGG TGCGCAGCAA TGATGATCTT
GTCAGCGTTG CGCCTAATCT TAAACAAGGT CATTACCTAG CGGAGCAGTG GATTCCTTTT
GATGCAGAGG TGTCTATCAT AGGTGTGCGC GGCGCCAGCG GCGAGGTGAG CTGTTACCCC
CTGACCGAGA ATCAGCATCA AAATGGGATT CTGGTGCGCT CAATGGCGCC TGCCAGAGGA
CTAAGCGGCG AGATGGTGCA GCAGGCGCAA AGCTATATGA CCAAATTGCT GCAAGCCCAA
GAGTATGTTG GTGTGCTCGC CATGGAGCTG TTTGTGCTGG GTGATAAGCT GCTGGTGAAT
GAGTTAGCAC CTCGGGTACA CAACAGCGGC CACTGGACTC AGCTCGGCGC TCAAACTTGC
CAGTTTGAGA ATCACATCCG CGCCGTCGCC GGACTCGCCC TGGGGGCAAC CTCGGCCATA
GGTAAGACCG GCATGCTGAA TCTGTTAGGT GTCGTTGCTC CGCCAATGGA CGCCCTAAGC
AGCAATGCCA GCCTGCACTG GTATAACAAG GCCGCCAAGC CCAACCGCAA GTTAGGACAC
ATCAACTTCA TGCTGGATGA CTACGCCCAA CTGGTTAGCC AGATGCAAAG CGTCGAGCAG
TCGCTGGTGA AGTGCTAA
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| Protein sequence | MRIGIIGCGQ LARMMALAGI PLGLKFSFVA DGGPDTDLSC VEGLGPVAPW QPGQSVSALY
EALGKPEVIT VEKEQVDLEL VRALEAHCII RPNVDSIAKC KSRIHEKQLL AELGIPCAPF
TYDVSLEESA KTLDYPMVIK SLDEGYDGKN QWVVRSNDDL VSVAPNLKQG HYLAEQWIPF
DAEVSIIGVR GASGEVSCYP LTENQHQNGI LVRSMAPARG LSGEMVQQAQ SYMTKLLQAQ
EYVGVLAMEL FVLGDKLLVN ELAPRVHNSG HWTQLGAQTC QFENHIRAVA GLALGATSAI
GKTGMLNLLG VVAPPMDALS SNASLHWYNK AAKPNRKLGH INFMLDDYAQ LVSQMQSVEQ
SLVKC
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