| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1235 |
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| Symbol | |
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| ID | 4921413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1435986 |
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| End bp | 1436885 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640162775 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093364 |
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| Protein GI | 127512167 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000110146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA CTTATGGAGT TAGCAAAGGT CGCAACGTCA CTGATGCCTT GTTGCGACTG
GGCGCTGTAT TATTGAGTAC GGTTTCCTTA GGTTCTGCAC AGTTAGCCCA TGCCGAGCAG
CAGGGTTTTT CTGTTACCCT GGGCGGTTTT TACGCTAACT CTGATTCCGG CATTGTGGTG
CAAAACCCAG ATCTCGGTAA AGATTTCACC CTAGATTTCG AGAACGATCT GGCCCTGGTA
GAGAAGGAGC TCCTGCCCAC GCTGGAACTG GCCTACTGGT TCAATGAAAA TCACGGCGTC
TATCTCGACT GGAAACGACT GGATCGCGAG GCCCGTAATC GCTCAATCTC TAAGCCCTAC
GAGTATACCG AAGTGAACTC GGGCCAGACC TACTTGGTGC AGGCGGGGGC GGATATCAGC
ACCATCTTTA ACGTGGATAT TCTGCGCCTG GGCTATCGCT ATAACTTTTA CAGTGGCGAG
GATGTCGATC TGACCCTGCT TGCCGGTCTG CATATCATGT GGCTCAAGCT GCAGTTTGTG
GGGGAAATTG GTGCCTGCGT CGACGACCAG TGCCAGGTGG TGGACGTTAA CCCCAAGAGC
AATGCCCTTA CCGAGGTGAC GGCGCCGCTA CCCGATCTCG GCCTGCAAGG GCGCTACCGT
ATTAACGATC GCTGGAGCCT CTCAGGTTGG GCGCAGTATT TCTATGTCAG CCTGGGGGAT
ACCAAGGGGC AATTGTTTGA TTTCAGCGCC GGGGTCAACT ACCGGCTGAA TGATTCTCTG
GATGTGGAGT TGGGCTATAA GTATTACAAG ATAGACGTCG AGGTCGAGAA AGATCTGGCC
GATTTCGATA TCTATTATGG TTTTAAAGGC CCGGCTTTGT CGCTAACCTA TCAGTTCTAG
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| Protein sequence | MKTTYGVSKG RNVTDALLRL GAVLLSTVSL GSAQLAHAEQ QGFSVTLGGF YANSDSGIVV
QNPDLGKDFT LDFENDLALV EKELLPTLEL AYWFNENHGV YLDWKRLDRE ARNRSISKPY
EYTEVNSGQT YLVQAGADIS TIFNVDILRL GYRYNFYSGE DVDLTLLAGL HIMWLKLQFV
GEIGACVDDQ CQVVDVNPKS NALTEVTAPL PDLGLQGRYR INDRWSLSGW AQYFYVSLGD
TKGQLFDFSA GVNYRLNDSL DVELGYKYYK IDVEVEKDLA DFDIYYGFKG PALSLTYQF
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