| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1230 |
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| Symbol | |
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| ID | 4921126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1429520 |
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| End bp | 1430029 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162770 |
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| Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
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| Protein accession | YP_001093359 |
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| Protein GI | 127512162 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
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| TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAGC CATTTGTTGC CGTACTCATG GGATCGGATT CTGATCTCCC AACAATGCAA
GCCACCTTAG ATGTACTTAA AGCTTTCGGT ATTCAATACG AAGCCAAGGT GACCTCGGCG
CACCGTACGC CTGCAGCGAC CCACGCTTAC GTTCACGATG CCGAAGAGCG TGGTTGTAAG
GTCTTTATCT GCGCGGCGGG TCTGGCGGCT CACCTGGCAG GTGCCGTAGC CGGTATCACC
ACACGTCCGG TTATCGGTGT GCCAGTAGAT TGCGGTCCAC TACAGGGCCA TGACGCTCTG
CTATCGACAG TGATGATGCC TGGCGGCGTG CCTGTGGCTA CCGTAGCTAT CGGCAGCGCG
GGTGCGAAGA ACGCGGGTTA CCTGGCGGCG CAGATGCTGG CCGTTGGCGA TGATGCCCTG
GCACTTGCGG TAAAAGAAGA GCGCGCTAAG TCGGCTGAAG CCGTACAGGC AAAAGATGCC
AAGCTACAAG AGAAGCTGGC TAACGCTTAA
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| Protein sequence | MTKPFVAVLM GSDSDLPTMQ ATLDVLKAFG IQYEAKVTSA HRTPAATHAY VHDAEERGCK
VFICAAGLAA HLAGAVAGIT TRPVIGVPVD CGPLQGHDAL LSTVMMPGGV PVATVAIGSA
GAKNAGYLAA QMLAVGDDAL ALAVKEERAK SAEAVQAKDA KLQEKLANA
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