| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1221 |
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| Symbol | |
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| ID | 4921224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1419368 |
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| End bp | 1420501 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640162761 |
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| Product | sodium ion-translocating decarboxylase, beta subunit |
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| Protein accession | YP_001093350 |
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| Protein GI | 127512153 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
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| TIGRFAM ID | [TIGR01109] sodium ion-translocating decarboxylase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.949455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGAT TAATCGCCTT TTGGGCCGAG TCGGGTATTG CTAACTTTAC CGGCGGCCAG
TTGTTGATGA TGGCAGTGGG GGCGCTCTTG CTCTATCTCG CCATCGCCAG AGGTTTCGAG
CCGTTGCTGC TCTTGCCTAT CGGTTTTGGC GCCATATTGG CCAACATCCC CAACGGGGGC
TTCACCGAAG AGGGCGGCAT GCTCTATTAC GCCTACCATG TGGGGATCGA AACCGGGGTC
TTTCCCCTGT TGATCTTCAT GGGGGTCGGG GCCCTGACCG ATTTTGGTGC CCTTATCGCC
AACCCTAAGA TGCTGTTGCT GGGGGCGGCT GCGCAGTTCG GGATCTTTGC CACCCTAATC
GGTGCCATCG CCCTTAACGC CGTGCCGGGC TTCGAGTTCT CCATGAAGGA TGCGGCGGCC
ATCGCCATCA TTGGCGGCGC CGATGGCCCG ACGGCCATCT TCCTCGCCTC CAAGCTGGCG
CCTGAGCTGC TCGGTGCCAT CGCAGTCGCG GCCTACTCTT ATATGGCGCT GGTGCCCATC
ATTCAGCCGC CTATCATGAA GCTGCTGACC ACTGAGGCTG AGCGTCAGAT CAAGATGGAG
CAACTGCGTG AGGTGAGTAA GCTTGAGAAG ATCATCTTCC CGCTGGCAGT GCTGGGGCTG
ACCATTCTCT TCCTGCCGGC GGCGACGCCT CTGGTGGGCA TGTTCTGTCT GGGCAACCTG
ATGCGTGAAT CTGGCGTGGT CGATAGACTC TCCAACACGG CGCAAAATGA GCTGATCAAC
ATAGTGACCA TCTTCTTGGG CCTGGCGGTA GGCTCCAAGC TCTCGGCCGA TAAGTTCCTG
CAGCTGGAAA CCTTAGGCAT CCTGGTGCTG GGGGCCGTGG CCTTCGGTAT CGGCACCGCG
GCTGGCGTGC TGATGGCTAA GCTGATGAGC AAGCTGTCTG GCGGTAAGAT CAATCCGCTG
ATCGGCGCCG CCGGCGTCTC GGCCGTACCT ATGGCCGCCC GTGTGGTCAA CAAGGTGGGT
CTGCAGGCCA ATCAGCAAAA CTTCCTCTTG ATGCACGCCA TGGGGCCAAA CGTGGCCGGC
GTGCTGGGCT CTGCGGTCGC AGCCGGTGTC TTGCTGGCGG TACTGGGTGG CTAG
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| Protein sequence | MDGLIAFWAE SGIANFTGGQ LLMMAVGALL LYLAIARGFE PLLLLPIGFG AILANIPNGG
FTEEGGMLYY AYHVGIETGV FPLLIFMGVG ALTDFGALIA NPKMLLLGAA AQFGIFATLI
GAIALNAVPG FEFSMKDAAA IAIIGGADGP TAIFLASKLA PELLGAIAVA AYSYMALVPI
IQPPIMKLLT TEAERQIKME QLREVSKLEK IIFPLAVLGL TILFLPAATP LVGMFCLGNL
MRESGVVDRL SNTAQNELIN IVTIFLGLAV GSKLSADKFL QLETLGILVL GAVAFGIGTA
AGVLMAKLMS KLSGGKINPL IGAAGVSAVP MAARVVNKVG LQANQQNFLL MHAMGPNVAG
VLGSAVAAGV LLAVLGG
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