| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1214 |
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| Symbol | |
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| ID | 4922773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1408043 |
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| End bp | 1410610 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640162748 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_001093343 |
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| Protein GI | 127512146 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCG TCGATACTCA ATATCTTGAA AAGCACACCC CCATGATGCG TCAATATCTG
ACGCTGAAAG CCGAAACACC CGATATGTTG CTTTTTTATC GTATGGGAGA TTTTTACGAG
CTCTTCTACG ACGATGCTAA GCGGGCCTCA GAGCTGCTGG GGATCTCCCT GACCGCTCGC
GGCAAGAGTG GCGGCGATCC TATCCCCATG GCAGGCATCC CCTACCATGC GGTAGAAGGC
TATCTTGCTA AGCTTGTGCA GCTCAGGGTA TCTGTGGCGA TCTGCGAGCA GATAGGCGAT
CCCGCCACGA CCAAGGGGCC GGTAGAACGT AAGATTGTTC GCATCGTCAC CCCGGGTACG
CTTACAGATG AGGCCCTGCT GCAGGAGCGG CAGGACAACC TGCTGGCCGC CGTCTATCAC
GGCAAGGTGG GTTTTGGTTA CGCGACCCTG GATGTCTCAT CCGGGCGCTT CGTGGTCACC
GAACTTGCCA GCAAAGAGGC GCTTGAAGCC GAGCTGCAAC GCACCAATCC AGCGGAGCTG
CTCTACAGCG AAGATTTCAG CGAGCCGGCT TTGATCGCCT CGCTGTCGGG TAAGCGTCGC
CGTCCCGAGT GGGAGTTCGA CTACGACACC AGCTACAAGC TACTGCTGGA ACAGTTCGGC
ACCAAAGATC TCTACGGCTT TGGCCTGGGG GAAGTCAGGT TATCGCTACA GGCGGCCGGC
TGTCTTATCC AGTATGTGAA AGATACCCAG CGTACCGCCC TGCCCCATAT CAACGCCATC
ACCCGCTTCA ATCAGTGCGA CAGCATAGTG CTGGATGCGG CCACCCGTAA GAATCTGGAG
CTGACCCGCA ACCTGCAAGG CGGTAGCGAC AACACCCTGG CCTCGGTACT GGATAACACG
GCAACTCCCA TGGGCAGCCG TATGTTGCAG CGCTGGATCC ACGAGCCGCT GCGCAACCAC
AACATCATCC GCGCCCGTCA TGATGCCATA GACGAGCTGC TGGACAACGG CTATCACGAG
AGCCTGCATG AACAGCTAAA AGCCCTCGGC GACATAGAAC GTATCACGGC GCGTCTGGCC
ATTCGTAGTG CCCGCCCGCG TGACTTTGCC CGTCTGCGTC AGGCCCTGGC CCTGCTGCCC
GAGATACAGC AGCAGCTGGC AGACTGCAAC AGCCCTCACC TCAAGGCGCT ATCGAGTCAC
CTGGGCGACT TCCCCGAGGA GCATGCCCTG CTAAGCCGCG CCATCGTCGA CAATCCGCCT
ATGCTGATCC GCGACGGCGG CGTGATCAAA GAGGGTTATC ACAACGAGCT GGATGAATGG
CGCAAACTCA GCCAGGGCGC GACCGACTAC CTCGCCGAGC TGGAAGCCCG GGAGAAGGCA
GCCACCGGCG CCTCGACTCT GAAGGTGGGC TACAACCGGG TGCACGGCTA CTACATAGAG
GTGAGTCGCC GCGAGTCGGA TCTGGTGCCT ATGAGCTACC AGCGCAGACA AACCCTTAAG
AACACCGAGC GTTACATAGT CGCCGAGCTT AAAGAGCATG AGGAGAAGGT ACTCTCCAGT
CAGGGCAAGG CGCTGGCGCT GGAGAAACAG CTGTGGGAAG AGCTGTTCGA TCTATTGATG
CCGCGCCTGC ACGAGCTACA GGCCTTCGCC CGCGCGGCAG CGGAGCTTGA TGTGATCACC
AACTTTGCCG AGCGCGCCGA GCAGCTCGAT TATCACAGAC CGGAACTCAC GGCCCAGAGC
GGCATACATA TCGAGGCGGG AAGACACCCA GTGGTCGAGC GCGTCAGTCA GACGCCGTTT
ATCGCCAACC CTGTCAGCCT CAACCCGGCA AGGCGCATGC TGATCGTTAC CGGCCCTAAC
ATGGGCGGTA AGTCGACCTA TATGCGCCAG GTGGCTCTGA TCACCCTTAT GGCCCATATA
GGTAGCTTCG TACCGGCCCA GAAGGCCGCC ATAGGCCCAG TGGATCGAAT CTTTACCCGT
ATTGGCGCGG CAGACGATCT CGCCTCCGGC CGCTCGACCT TCATGGTGGA GATGACGGAA
ACCGCCAACA TACTACATAA CGCGACGCCC GAGAGCCTGG TATTGATGGA TGAGATTGGC
CGCGGCACCT CGACCTATGA TGGCTTGTCG CTGGCCTGGT CCGCCGCCGA GCATCTGGCG
CAGAACTTAA AATCTATGAC CCTGTTTGCC ACCCACTATT TTGAGCTAAC CCAGCTGCCG
GATCAGATGG AAAATGTGGC CAACGTGCAC CTCGACGCCA TAGAGCATGA CGACACCATC
GCCTTCATGC ACGCGGTGCA GGAAGGTGCG GCGAGTAAGA GTTATGGCCT TCAAGTCGCG
GCGCTGGCTG GTGTTCCGGC CAAGGTGGTG CAGGCAGCCA AGCACAAGCT GCATCATCTT
GAGAGCCGGG ATAGAGAGGA GGAGCTCCCT GAACTGAGAC AGGCCCAGCT GAGCATGACC
ATGCCGGAGA CCTCAAAGGC GCTGGACAGG TTAGATACCA TAGATCCCGA CAGCCTGACG
CCGAGACAGG CGCTGGATCT TCTCTATGAG CTCAAGCAGC TACGCTAA
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| Protein sequence | MNAVDTQYLE KHTPMMRQYL TLKAETPDML LFYRMGDFYE LFYDDAKRAS ELLGISLTAR
GKSGGDPIPM AGIPYHAVEG YLAKLVQLRV SVAICEQIGD PATTKGPVER KIVRIVTPGT
LTDEALLQER QDNLLAAVYH GKVGFGYATL DVSSGRFVVT ELASKEALEA ELQRTNPAEL
LYSEDFSEPA LIASLSGKRR RPEWEFDYDT SYKLLLEQFG TKDLYGFGLG EVRLSLQAAG
CLIQYVKDTQ RTALPHINAI TRFNQCDSIV LDAATRKNLE LTRNLQGGSD NTLASVLDNT
ATPMGSRMLQ RWIHEPLRNH NIIRARHDAI DELLDNGYHE SLHEQLKALG DIERITARLA
IRSARPRDFA RLRQALALLP EIQQQLADCN SPHLKALSSH LGDFPEEHAL LSRAIVDNPP
MLIRDGGVIK EGYHNELDEW RKLSQGATDY LAELEAREKA ATGASTLKVG YNRVHGYYIE
VSRRESDLVP MSYQRRQTLK NTERYIVAEL KEHEEKVLSS QGKALALEKQ LWEELFDLLM
PRLHELQAFA RAAAELDVIT NFAERAEQLD YHRPELTAQS GIHIEAGRHP VVERVSQTPF
IANPVSLNPA RRMLIVTGPN MGGKSTYMRQ VALITLMAHI GSFVPAQKAA IGPVDRIFTR
IGAADDLASG RSTFMVEMTE TANILHNATP ESLVLMDEIG RGTSTYDGLS LAWSAAEHLA
QNLKSMTLFA THYFELTQLP DQMENVANVH LDAIEHDDTI AFMHAVQEGA ASKSYGLQVA
ALAGVPAKVV QAAKHKLHHL ESRDREEELP ELRQAQLSMT MPETSKALDR LDTIDPDSLT
PRQALDLLYE LKQLR
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