| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1212 |
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| Symbol | |
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| ID | 4922363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1405799 |
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| End bp | 1406731 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640162746 |
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| Product | peptidase M23B |
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| Protein accession | YP_001093341 |
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| Protein GI | 127512144 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAGCG CCCCGAGTCG GTTGAGGTTT TGTCAGAAGC CAATAGGCAT ACTGTGCGCC
TTACTGCTCA GCTGTCTGCT GAGCGCCTGT AGTTTTCAGG CCCATTCTCC CGCTCCCGTG
GTGAACGTCA ACTCGCCGGT GAAGAAAGCC TATAAAAAGG GAGGCCTCAC CTCCGACCAC
TACAAGGTCA AGCGCGGCGA TACCCTCTAT TCGATCGCCT GGGCGGCCAA CAAAGATTTT
GCCGAAATTG CCCGATATAA CGGGCTTCGC AAGCCCTATA CCATCTATCC AGGGCAGGTT
TTAAAGCTTA AATCGACAAA CGCTGTTACA AATAGCAAAA CCCAGCGTAG CACTCAGGTA
TCGAGTAAAA AAACGCAACA AAACACAGCT AAAAATCAAC CTAAACAAAC AGTTAATTCT
AGCCAGCAGG CTGCTGCCAG TAAAACGGCA TTGGCGAAAA AATCGCTTGA TCGGGGCGAT
AAATCTGCGT ACGCTGTAAC AACTGGTCAA CAAAATGTTA ACGGCGTTAT CCACAAGCCC
AGTAGCACCC TACCCAAGAA GGTCCAGCGC TGGCATTGGC CCGTTAAAGG CAAGTTGATC
GGCACATTCT CTACCAAGGA ACAAGGTAAT AAAGGGATTA AGATCGCAGG ATCCCGAGGC
GATCGCATTC AGGCCGCCGC CGATGGGCGA GTGGTGTATG CGGGAAATGC GCTAAGGGGA
TACGGCAATT TGGTGATCAT TAAGCATAGC GATGACTATC TCAGTGCTTA TGCTCATGCC
GATAAGATCT TAGTAAAAGA GAAGCAGTTC GTTACCGCGG GACAAACGGT GGCGAAAATG
GGACAAACGG GTACCAATAG GGTGATGCTG CATTTCGAGA TACGGTATCA CGGCAAATCC
GTCGACCCAC TTAAATTTTT GCCTAAATCA TAA
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| Protein sequence | MLSAPSRLRF CQKPIGILCA LLLSCLLSAC SFQAHSPAPV VNVNSPVKKA YKKGGLTSDH
YKVKRGDTLY SIAWAANKDF AEIARYNGLR KPYTIYPGQV LKLKSTNAVT NSKTQRSTQV
SSKKTQQNTA KNQPKQTVNS SQQAAASKTA LAKKSLDRGD KSAYAVTTGQ QNVNGVIHKP
SSTLPKKVQR WHWPVKGKLI GTFSTKEQGN KGIKIAGSRG DRIQAAADGR VVYAGNALRG
YGNLVIIKHS DDYLSAYAHA DKILVKEKQF VTAGQTVAKM GQTGTNRVML HFEIRYHGKS
VDPLKFLPKS
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