| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1196 |
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| Symbol | |
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| ID | 4921481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1387289 |
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| End bp | 1388950 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162730 |
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| Product | recombination and repair protein |
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| Protein accession | YP_001093325 |
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| Protein GI | 127512128 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0497] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTGTC AGCTCAGCAT CAATAACTTT GCCATTGTCC GCTTTTTAGA ACTCGACTTT
AAGTCTGGGA TGACCAGCAT CACAGGCGAA ACCGGCGCGG GAAAATCGAT TGCCATCGAT
GCCTTAGGCT TATGCCTGGG CAATCGCGCC GATGCCAATA CCGTCAGACC GGGCGCCAGT
AAGGCCGAAG TCAGTGCCCG CTTCGCCCTC AACGATATCC CGCTGGCCAA ACGTTGGCTA
GAAGACAATG ACCTTGAGCT AGACGACGAA TGTATCCTAC GCCGCACCAT AGGCAGCGAC
GGTCGCTCAC GCGCCTACAT CAACGGCAAC CCTGTGCCCC TCAACCAGAT GCGTGCCCTG
GGCCAGCAAC TTATCGGCAT TCACGGCCAA CATGCCCACC ACGCCATGTT AAAGAGTGAG
CATCAACTTA CTCTGCTCGA CAGCTATGCC AACCACAAGA TGTTGCTCGA GGCCTGTAGC
GCCAGCTACC AGCGCTTTAA GCTGATCCAA AAGGAGCTGA GCCAGCTACA GCAGTCGCAA
CATGAGCGCA TCGCCCGCAA GCAGCTGCTG CAATATCAGG TCGAAGAACT CGACGAATTC
GCCCTGGGCG AAGAAGAGTT CGATGAGATA GAGGCCGAGC ATAAGAAACT GGCCAACGGC
ACTGCCCTGA TCCAAGCCTG CCAGCGCACC CTCTACCTTC TACAGGATAA TGAAGAGGGC
GCCATAGAAT CGCTGCTCAA CATGAGTCTG GATCAGGCCC AAGAGCTCGA AGGTTACGAT
CCTGAACTCA AAGGGGTGGG TAACATGCTT AACGATGCCC TGATCCAGGT ACAGGAGAGT
AGCAGTGAGC TACAACGTTA CTTAGATAAG TTGGAGCTGG ACCCGGAACA TTTTGCCGCC
CTAGAGCAGC GCCTGTCGAA GATCATGATG CTAGCACGTA AGCACCATGT GAACGCCAAA
GATCTCTATC AGCATCATCA GGCACTAAGC CAGGAGCTGA GCGAGCTGGA TTCGGATGAG
GAGAAGCTCG ATGAGATCGC CCAGCAGCTC GAGAGTTGCC GCGAGAGCTT CATCGCCCAC
GCCCAGAAGC TCAGCCAGAG CCGCCAGCGT TACGCCAAGG AGCTGGACAA GCAGGTTACC
CGCTCTATCC ATGAGCTCAG CATGCCCAAG GGCAAGTTTA TCATCGACGT GCAGTTCAAC
CCCGAGATGA TGTCGCCCAA CGGCTGCGAT ACTGTGGAGT TTCAGGTGAC CACCAACCCG
GGTCAGCCGC TGCAACCCAT CGCCAAGGTA GCTTCGGGCG GCGAGCTGTC GCGTATCGGT
CTGGGCATCC AGGTGATCAC CGCCAAGAAG GTCGCCACCC CGACCCTCAT CTTCGACGAG
GTCGACGTGG GGATCTCAGG CCCGACCGCC GCCGTGGTGG GCAAGATGCT GCGCGCCCTG
GGCGAGTCCA CCCAGGTGCT GTGTGTGACC CACCTGCCTC AGGTCGCCGG CAATGGTCAT
CAGCATATGT TCGTCAACAA GCAGAGCAAG GCAGGACAAA CCGAGACTTC CATGGTGCCG
CTGGACAAGG GACAGCGTAT CGAAGAGCTG GCGCGCCTAC TTGGTGGTGA TGTCATCACC
AACAATACTC TGGCCAACGC CAAGGAGTTA CTGCAAGGCT AG
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| Protein sequence | MLCQLSINNF AIVRFLELDF KSGMTSITGE TGAGKSIAID ALGLCLGNRA DANTVRPGAS
KAEVSARFAL NDIPLAKRWL EDNDLELDDE CILRRTIGSD GRSRAYINGN PVPLNQMRAL
GQQLIGIHGQ HAHHAMLKSE HQLTLLDSYA NHKMLLEACS ASYQRFKLIQ KELSQLQQSQ
HERIARKQLL QYQVEELDEF ALGEEEFDEI EAEHKKLANG TALIQACQRT LYLLQDNEEG
AIESLLNMSL DQAQELEGYD PELKGVGNML NDALIQVQES SSELQRYLDK LELDPEHFAA
LEQRLSKIMM LARKHHVNAK DLYQHHQALS QELSELDSDE EKLDEIAQQL ESCRESFIAH
AQKLSQSRQR YAKELDKQVT RSIHELSMPK GKFIIDVQFN PEMMSPNGCD TVEFQVTTNP
GQPLQPIAKV ASGGELSRIG LGIQVITAKK VATPTLIFDE VDVGISGPTA AVVGKMLRAL
GESTQVLCVT HLPQVAGNGH QHMFVNKQSK AGQTETSMVP LDKGQRIEEL ARLLGGDVIT
NNTLANAKEL LQG
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