| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1192 |
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| Symbol | |
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| ID | 4922580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1383674 |
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| End bp | 1384645 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162726 |
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| Product | thiamine-monophosphate kinase |
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| Protein accession | YP_001093321 |
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| Protein GI | 127512124 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0611] Thiamine monophosphate kinase |
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| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0510899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTCTTA AGACTGTGAA AGAGTTTAAA TTAATCGATC ATTTCTTTGC TAACCTTGGC
CAGACCCGCC GCGATGTGCA CCTGGGGATC GGCGACGACT GCGCCCTGGT CCAGCCCGCC
GAGAACAAGG TGATTGCCAT CTCCTGCGAC ACCCTGGTTG AAAATGTACA CTTCTATGCC
GACATGCCCG CCAAGGCACT GGGTTACAAG GCGCTGGCGG TTAACCTGTC GGATCTCGCC
GCCATGGGCG CAGAGCCCGC CTGGATGACG CTTGCCCTTA CCCTACCTGA GGTGGATGAG
ACCTGGCTGG AGGAGTTTAG TCAGGGACTG AATGAGGCGG CGCAGTATTA CGGCGTTGCC
CTGGTGGGCG GCGATACTAC CCGCGGCCCC AAGTCGATCA CCATCACCAT CAATGGCCAA
GTGCCAGAGG GCAAGGCCCA TACAAGGGGC GGCGCCAAGA ATGGCGACTG GATCTATGTG
ACCGGCTCCC TCGGTGATTC GGCCGTGGGG TTGGCGATTC TGGGTGATAA GCTCAATATC
GACGGGGAGG CGAGGGAGTA TTTTATTCAA CGCCACTATT TCCCAACCCC AAGAGTGCTT
GCGGGTCAGT CGCTTAGAGG ATTGGCCTCG AGCGCCATCG ATCTCTCCGA TGGTTTTGTC
TCGGATATCG GTCATATCCT CAAGCGCTCG GCGGTGGGTG CCGTGGTGGA TGTGGATCGT
CTGCCCCTGT CGGCTCAGAT GCGTGAATCT TTGGCTGAGA CCGAGGCGCT GGGTTATGCC
CTAACGGGTG GTGAGGATTA CGAGCTGCTG TTTACCGTCC CGGAGGCTCA ACGTGGCGCG
CTGGAGACGG CCCTGGCCCA TGCCGGTGTG AGCTTTACAC AGGTTGGTCA GATCGGCACT
GGCGATAAGC TGCGCCTCAT CAAGGATGGC GAGCCCTACA CACCGACTCA ATTTGGTTTC
GAGCACTTTT AA
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| Protein sequence | MVLKTVKEFK LIDHFFANLG QTRRDVHLGI GDDCALVQPA ENKVIAISCD TLVENVHFYA
DMPAKALGYK ALAVNLSDLA AMGAEPAWMT LALTLPEVDE TWLEEFSQGL NEAAQYYGVA
LVGGDTTRGP KSITITINGQ VPEGKAHTRG GAKNGDWIYV TGSLGDSAVG LAILGDKLNI
DGEAREYFIQ RHYFPTPRVL AGQSLRGLAS SAIDLSDGFV SDIGHILKRS AVGAVVDVDR
LPLSAQMRES LAETEALGYA LTGGEDYELL FTVPEAQRGA LETALAHAGV SFTQVGQIGT
GDKLRLIKDG EPYTPTQFGF EHF
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