| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1189 |
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| Symbol | |
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| ID | 4920973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1381435 |
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| End bp | 1382538 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162723 |
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| Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| Protein accession | YP_001093318 |
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| Protein GI | 127512121 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II |
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| TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000541261 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.940375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACTAC ACAGCATAGA AGCGATTATC GAAGATATCC GTCTGGGTAA GATGGTTATC
TTGATGGATG ACGAAGACAG AGAGAATGAA GGCGACCTGA TCATGGCCGC TAACCTAGTG
ACGCCCGAGG CGATCAACTT CATGGCCACC TATGGCCGTG GCCTCATCTG TCAGACCATG
ACCAAGGCGC GCTGCGAGCA GCTCAACCTG CCGCTGATGG TGAGCAACAA CAATGCCCAG
TTCTCCACCA ACTTCACCGT GTCTATCGAG GCGGCCGAAG GGGTGACCAC TGGTATCTCG
GCCTATGACA GAGCCGTTAC CGTACAGGCC GCCGTGGCCC GTGACGCCAA GCCGTCGGAT
ATCGTGCAGC CAGGTCACAT CTTCCCACTG ATGGCCCAAG AGGGCGGGGT GCTGATCCGC
GCCGGTCATA CCGAGGCGGG TTGCGACCTG GCCCGTCTGG CAGGCCATGA GCCGTCGGCG
GTGATTGTCG AGATCCTCAA CGAAGATGGC ACCATGGCGC GTCGTCCAGA TCTTGAGGTG
TTTGCCGAGA AGCATGGCCT CAAGATAGGC ACCATCGCCG ATCTCATCGA ATACCGTAAC
ACCAAGGAAA CGACAGTGGT GCGCGAGGCC AAGTGCAAGC TGCCGACCCG TTTCGGCGAG
TTCAACATGA TCACCTACCG CGACACCATA GATAACCAAT TGCATTATGT GCTGGTGAAG
GGTGAAGTTC AGGCTAACGC TATGGTGCGT GTGCACCTGC AAAACACCTT CAATGATCTG
CTGCACTCTG AGCGCGATGA GAAGCGTAGC TGGCCGCTGG AAAAAGCCAT GGCGCGTATC
GCCGATGAAG GCGGCGTCTT GGTGGTGCTG GGTCATCAGC AGAGCAACGA AGAGTTGGTG
GCCAAGGTGA AGGCCTTCGA GGCGGAAGAC AAGGGGGAAG TCGGCGCACC GGCGCAGTGG
CAAGGCACCT CACGTCAGGT GGGTGTGGGC TCGCAGATCC TGGCCGATGT GGGCGTGACC
AGCATGCGTC TGCTCAGCTC GCCTAAACGT TACCATTCGC TGTCGGGTTT CGGCTTGGAA
GTAACTGAAT ACATTGCAGA ATAA
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| Protein sequence | MALHSIEAII EDIRLGKMVI LMDDEDRENE GDLIMAANLV TPEAINFMAT YGRGLICQTM
TKARCEQLNL PLMVSNNNAQ FSTNFTVSIE AAEGVTTGIS AYDRAVTVQA AVARDAKPSD
IVQPGHIFPL MAQEGGVLIR AGHTEAGCDL ARLAGHEPSA VIVEILNEDG TMARRPDLEV
FAEKHGLKIG TIADLIEYRN TKETTVVREA KCKLPTRFGE FNMITYRDTI DNQLHYVLVK
GEVQANAMVR VHLQNTFNDL LHSERDEKRS WPLEKAMARI ADEGGVLVVL GHQQSNEELV
AKVKAFEAED KGEVGAPAQW QGTSRQVGVG SQILADVGVT SMRLLSSPKR YHSLSGFGLE
VTEYIAE
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