| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1185 |
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| Symbol | glyA |
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| ID | 4923651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1377630 |
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| End bp | 1378883 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640162719 |
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| Product | serine hydroxymethyltransferase |
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| Protein accession | YP_001093314 |
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| Protein GI | 127512117 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.961366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAA AAGAGATGAA CATCGCTGAC TTTGATCCGC AACTGTTTCA AGCGATCCAG
GAAGAGACTC GTCGTCAAGA AGAGCACATC GAGCTAATCG CCTCGGAGAA CTACACCTCT
CCTCGCGTGA TGGAGGCTCA AGGTTCTCAG CTGACGAACA AGTACGCCGA AGGCTATCCT
GGCAAGCGTT ACTACGGTGG TTGTGAACAT GTCGACATCG TTGAGAACCT GGCCATCGAA
CGCGCCAAGG AACTTTTCGG TGCGACCTAT GCTAACGTTC AGCCTCACTC CGGCTCACAG
GCTAACAGCG CAGTCTACAT GGCGCTACTG CAACCAGGCG ATACCGTTCT GGGTATGAAC
CTGGCTCACG GCGGTCACCT GACGCACGGC TCTCCAGTAA ACTTCTCTGG CAAGCTATAC
AACATAGTTC CTTACGGCAT CGACGAGTCT GGCAAGATCG ACTACGACGA GATGGAGCGT
CTGGCCGTTG AGCACAAGCC TAAGATGATG ATCGGTGGTT TCTCTGCCTA TTCTGGTATC
GTCGACTGGG CGCGCATGCG TGAAATCGCC GACAAGATTG GCGCTTACCT GTTTGTCGAC
ATGGCGCACG TTGCAGGCCT TATCGCAGCC GGTGTCTATC CAAACCCTGT GCCACACGCA
CACGTGGTAA CTTCTACTAC TCACAAGACC CTAGCCGGTC CTCGCGGCGG TATTATTCTG
TCTGCGGCGA ACGATGAAGA CTTGTACAAG AAGCTGAACT CTGCGGTATT CCCAGGTGGT
CAGGGTGGCC CATTGATGCA CGTTATCGCG GGTAAGGCGG TAGCCTTCAA GGAAGCGCTG
TCTCCTGAGT TCAAGGAATA TCAACAGCAG GTAGTAGTTA ACGCTAAGGC GATGGCTAAC
ACCTTCATCG AGCGTGGTTT TGATGTGGTT TCTGGCGGCA CCGAAAACCA CCTGTTCCTG
CTGGACCTGA TCGCTAAAGA TATTACAGGT AAAGATGCCG ATGCGGCGCT GGGCCGTGCC
AACATCACGG TAAACAAGAA CTCAGTACCT AACGACCCAC GTTCACCTTT CGTGACCTCG
GGCCTGCGTA TCGGTTCGCC AGCCATCACA CGTCGTGGCT TCAAAGAAGC CGAAGCGGTT
GAGCTGACCA ACTGGATCTG TGATGTGTTA GATGACATCA ACAACGAAGC CACTATCGAG
CGCGTGAAGA ACCAGGTGCT TGAATTGTGC GCTAAGTTCC CTGTTTACGG TTAA
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| Protein sequence | MLKKEMNIAD FDPQLFQAIQ EETRRQEEHI ELIASENYTS PRVMEAQGSQ LTNKYAEGYP
GKRYYGGCEH VDIVENLAIE RAKELFGATY ANVQPHSGSQ ANSAVYMALL QPGDTVLGMN
LAHGGHLTHG SPVNFSGKLY NIVPYGIDES GKIDYDEMER LAVEHKPKMM IGGFSAYSGI
VDWARMREIA DKIGAYLFVD MAHVAGLIAA GVYPNPVPHA HVVTSTTHKT LAGPRGGIIL
SAANDEDLYK KLNSAVFPGG QGGPLMHVIA GKAVAFKEAL SPEFKEYQQQ VVVNAKAMAN
TFIERGFDVV SGGTENHLFL LDLIAKDITG KDADAALGRA NITVNKNSVP NDPRSPFVTS
GLRIGSPAIT RRGFKEAEAV ELTNWICDVL DDINNEATIE RVKNQVLELC AKFPVYG
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