| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1161 |
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| Symbol | |
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| ID | 4921489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1334285 |
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| End bp | 1335586 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162695 |
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| Product | NADH dehydrogenase |
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| Protein accession | YP_001093290 |
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| Protein GI | 127512093 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00528742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGGTGCAG TGGCCAATAT CGTCATCGTT GGCGGTGGTG CGGGTGGAAT GGAGATAGCG
ACCAAGTTAG GTCGTAAACT GGGACGTAAG GGCAAGGCCA AGATCACCCT TATCGACTGC
GCCGACAGCC ATATCTGGAA ACCCCTGCTG CACGAGGTCG CCACCGGGGC GCTGGATATC
GGCATAGATG CCATCAGCTA CCGAGGTCAT GCCGCCGCCC ACGGCTACCA TTTTCAGCAG
GGGGCGATGA CAGATATCGA CCGCGAGCAC AAGCAAGTGA TCCTGGCCCC CATCTTAGAC
GAAAAGGGCA ATGAACTCCT GCCTGCCCGG CGCATAGATT ACGACTATCT GGTGCTGGCC
ATCGGCAGTA TCGCCAACGA TTTTAAGATC CCTGGGGTCA GGGAACACTG CGTCTTCCTC
GACAACACCC AACAGGCGAT GCAGATCCGC ACCATGCTGC TCAATAAATT TATGCGTTAT
GCCAGCCACC ACCAGCTGGA CGACAAGATC AAAATCGCCG TGGTCGGCGC CGGGGCGACA
GGCGTCGAGA TGTCCGCCGA GATGCATCAT GCGGTCGAGC AGCTCAGCGG CTTCGGCTAT
AAGATAGACA CCAGCCTGTT AGAGGTTACG CTGATCGAGG CCGACTCACG TATCCTGCCC
AAGGTGGAGA AGCAGGAGAT CTCCCAGGCG GTAACGAACC AGCTTAATCA GATTGGCGTT
CGAGTCATGA CCAATACTCG CATCGACCGG GTGGATGAGA GTGCGCTGCA TACCTGCGAC
GGCCAGACCA TCGCCAGCGA CATGACCATC TGGTCCACCG GGGTGAAGGC GCCCGACTTT
ATGCGTGAGA TTGGCGGCCT GGAAAGCAAT CAGATCAATC AGGTGATGGT TAAGCCCAAC
ATGCAGACCA CCCGGGATCC CCACATCTTC GCCATCGGCG ACTGCGCCGC CTGCCCACAG
CCAGACGGCT CCTGGGTGCC GCCGAGAGGC CAGTCGGCGC GGCAGATGGC GCTGATGACG
GCCGACAACA TCAGCCTGAT GCTAGCCGGG CAGCCCCCCA GCAAGGAGTA CCTCTATAAA
GATCTCGGCT CCCTGGTAAA CCTGTCCAAG TTCCATACCG TGGGCAACCT GATGTCCTTC
ATCGGCGGTG GTGTATTGGT GGAGGGCAAG ATAGCCAGGT TCGTTTATAC CTCGCTCTAT
CGGCGCCATC TAATTGAACT ACATGGGATC TTTAAAGGTA CCCTGCTGAT GTTTGCCAAA
GGGATCAGCC GCATCATCCA CCCTCACCTC AAGCTGCACT AA
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| Protein sequence | MGAVANIVIV GGGAGGMEIA TKLGRKLGRK GKAKITLIDC ADSHIWKPLL HEVATGALDI
GIDAISYRGH AAAHGYHFQQ GAMTDIDREH KQVILAPILD EKGNELLPAR RIDYDYLVLA
IGSIANDFKI PGVREHCVFL DNTQQAMQIR TMLLNKFMRY ASHHQLDDKI KIAVVGAGAT
GVEMSAEMHH AVEQLSGFGY KIDTSLLEVT LIEADSRILP KVEKQEISQA VTNQLNQIGV
RVMTNTRIDR VDESALHTCD GQTIASDMTI WSTGVKAPDF MREIGGLESN QINQVMVKPN
MQTTRDPHIF AIGDCAACPQ PDGSWVPPRG QSARQMALMT ADNISLMLAG QPPSKEYLYK
DLGSLVNLSK FHTVGNLMSF IGGGVLVEGK IARFVYTSLY RRHLIELHGI FKGTLLMFAK
GISRIIHPHL KLH
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