| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1154 |
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| Symbol | |
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| ID | 4923245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1326958 |
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| End bp | 1327611 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162688 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093283 |
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| Protein GI | 127512086 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2860] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000736449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00491561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAAGAAG CTGAATTTAT CACCCTCCTC TGGCTCATCG GCATACTGGC CGAGGCCATG
ACAGGTGCGC TGTGCGCCGG CAGAAAACAG ATGGATCTGT TTGGCGTGGT CATCATAGGC
TGTGCCACCG CCATAGGCGG CGGTACCCTA CGCGACATCC TCCTGGGCAA CTATCCCCTC
ATCTGGGTAG AGAATATCCA TTACCTACTG GCCATCGCCT TCGCCTCGCT GCTGACGGTT
ATCATCTCGC CCGTGATGCG CTATCTCTCC AAACTGTTTC TGGCCATAGA CGCTTTGGGG
CTGGCGGTAT TTTCCATTGT CGGCGCCCAG AAGACCCTGC TGCTGGGCTT TAGCCCGACA
CTTGCCATCG TCATGGGGGT GGTGACCGGC GTCTTCGGCG GGGTGATCCG CGACATCCTC
TGTAATCAGG TGCCGCTGAT CTTCAAGAAG GAGCTCTACG CCCTGGTCTC GCTGACCACC
GCTAGCCTCT ACATGCTGCT GCGCAGCTTT GAGGTGACCG AGTGGATCAA CCTGGCCATC
AGCCTGAGTG TTGGCTTTAG CTTCCGCATG CTGGCCATTC GCTATCACTG GGGCATGCCC
AAGTTCGACT ATCAGCATGG CGATCACGGC AACCAGGACA GTCAGGCCCA CTAA
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| Protein sequence | MQEAEFITLL WLIGILAEAM TGALCAGRKQ MDLFGVVIIG CATAIGGGTL RDILLGNYPL
IWVENIHYLL AIAFASLLTV IISPVMRYLS KLFLAIDALG LAVFSIVGAQ KTLLLGFSPT
LAIVMGVVTG VFGGVIRDIL CNQVPLIFKK ELYALVSLTT ASLYMLLRSF EVTEWINLAI
SLSVGFSFRM LAIRYHWGMP KFDYQHGDHG NQDSQAH
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