| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1152 |
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| Symbol | |
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| ID | 4921087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1325882 |
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| End bp | 1326706 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640162687 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001093282 |
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| Protein GI | 127512085 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0163398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0148083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATT TGGATAAATA TATCGAGCAA GCGCCTGAGC TGATCCTGAC CTATGGTCTG
CAGGTGGTCT TCGCCATAAT CATCTTTATT ATTGGTAAGT ACCTGGCCAA TGTGGCTAAG
AAGCTTACCA CTAAGTTGAT GAATAAGCGT AAGATCGACA AGACTGTGGT CTCTTTCGTG
GCTAACATGG CCTGGGCTTT GGTGTTTGTC TTCACTGTGA TCGCCACGCT TGGGCAGATC
GGTGTTCAGA CGGCTTCTCT AGTTGCCGTT ATCGGTGCCG CCGGTTTGGC CGTTGGTCTG
GCGCTGCAGG GCTCGCTGTC TAACTTCGCC TCTGGCGTGC TTATGGTGCT CTTCCGTCCT
TGCCGCGTAG GCGACTACAT CGAGGCGGCG GGTATCGCGG GTACGGTCGA TGAGATCACC
ATCTTCTCGA CTAAGCTGCG CACCCCTGAT AACAAGGTGA TTGTGGCGCC TAACTCATCA
ATCATGAACG GTACCATCAC CAACTACTCA GCCATGGAAA CCCGTCGTAT CGACTTGGTT
ATCGGCGTGT CTTACGATGC CGACCTTAAG CAGACCAAGG AAGTGCTTAA GCAGGTATTG
GACAACAACG CCTACATTTT GAAAGATCCT GCCTACACAG TGGCACTGAC CGAGCTGGCG
GACTCTTCGG TTAACTTCGT GGTACGTCCT TGGGTCAAGG GTAGCGACTA CTGGCCGGCC
CGTTTCGAGA TCCTAGAGCA GATCAAGCTG GCGCTGGACG AGAACAATAT CGGTATCCCA
TATCCACAGA TGGATATCTA TGTCAAAGAG ACGCCAGCGG CTTAA
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| Protein sequence | MENLDKYIEQ APELILTYGL QVVFAIIIFI IGKYLANVAK KLTTKLMNKR KIDKTVVSFV
ANMAWALVFV FTVIATLGQI GVQTASLVAV IGAAGLAVGL ALQGSLSNFA SGVLMVLFRP
CRVGDYIEAA GIAGTVDEIT IFSTKLRTPD NKVIVAPNSS IMNGTITNYS AMETRRIDLV
IGVSYDADLK QTKEVLKQVL DNNAYILKDP AYTVALTELA DSSVNFVVRP WVKGSDYWPA
RFEILEQIKL ALDENNIGIP YPQMDIYVKE TPAA
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