| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1145 |
|---|
| Symbol | |
|---|
| ID | 4922424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 1321092 |
|---|
| End bp | 1321421 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640162680 |
|---|
| Product | translation initiation factor Sui1 |
|---|
| Protein accession | YP_001093275 |
|---|
| Protein GI | 127512078 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins |
|---|
| TIGRFAM ID | [TIGR01158] translation initation factor SUI1, putative, prokaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.244875 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0321513 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATCG ATCCCAATAT TGCCCTGGTG TACAGCACTG ATGGCGGCAA AATCGACCAG
CCCAAGGAAA CCAAGGCCAT CCCAGAAGGC GACGGCATAG TGCGCATTCA TAAAGACAGC
AAGGGCCGTA AAGGCAAAGG CGTCTCAGTG ATCAAGGGCC TTGGCCTGGA CGAGAAAGAG
CTCAAGGCAC TGGCGCAGAA GCTGAAAAAA CAGTGCGGCT GCGGCGGCAC GGTAAAAGAG
TTCAACATAG AGATCCAAAC AGACAACAGA GAGCAGCTGA AGACACTGCT GGAAAAACTG
AATTATCAGG TGAAACTGGC GGGTGGTTAA
|
|---|
| Protein sequence | MRIDPNIALV YSTDGGKIDQ PKETKAIPEG DGIVRIHKDS KGRKGKGVSV IKGLGLDEKE
LKALAQKLKK QCGCGGTVKE FNIEIQTDNR EQLKTLLEKL NYQVKLAGG
|
|---|
| |