| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1136 |
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| Symbol | |
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| ID | 4923515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1310633 |
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| End bp | 1311451 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162671 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_001093266 |
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| Protein GI | 127512069 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0273851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.368215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGA AGAAGATTTG TTTTATCGGC GCGGGCAACA TGACCCGCAG TATCACCAGC
GGCCTGGTCA AGGGCGGCTA TGCACCTGAG CTTATTCACG CCACTAACCC CAGCGAAGGC
AAACTCATCG CCCTTAAGCA GGATTTAGGC ATTCGAGTCT CCCACGACAA CCTGCAGGCT
GCCGATGAGG CCGACGTTAT CGTACTGGCG GTGAAACCTC AGCTGATGCA GCAGGTGTGC
GAGGCGATGA GCGGACTCAA CTTGAAAGAC AAGCTTATCG TCACCATCGC CGCCGGGGTC
ACGGCCGAGC GCTACCACGC CTTCTTCAAG CAGCCGATTC AGCTTATCCG CACCATGCCC
AACACCCCGA CGCAAATAGG CCTTGGCATG ACGGGGCTCT ACGCCGAGCA GGGCGTGAGC
GCGCAAGACC GCGAGCTGTG TGAGCAGCTG ATGCAAACCG GCGGCGAAAC CGTATGGGTC
GAAAAGGAAG AGGATCTCAA TCAGGTGATC GCCCTGGCGG GCAGTTCTCC AGCCTATTTT
TTCCTTATGA TGGAGGCTAT GATTGACAGT GCCAAACAAG ATGGCGTCGA CGAGCAGACC
GCCCGAGAGA TGGTGCAGCA GGCAGCATTA GGCGCGGCCG CTATGGTGAA GCAGAATCCA
CAGCTTTCGC CAGCGCAATT AAGGGAAAAT GTCACCTCTA AGGGCGGCAC CACGGCTCAG
GCCCTAGCGG CGTTCGAGCG CGCCGGCCTG AGGGAGATAG TGCGCACCGC CATGCACGAC
TGCATGGACA GGGCTCAGGA GATGGCGAAG CAGTTTTAG
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| Protein sequence | MTQKKICFIG AGNMTRSITS GLVKGGYAPE LIHATNPSEG KLIALKQDLG IRVSHDNLQA
ADEADVIVLA VKPQLMQQVC EAMSGLNLKD KLIVTIAAGV TAERYHAFFK QPIQLIRTMP
NTPTQIGLGM TGLYAEQGVS AQDRELCEQL MQTGGETVWV EKEEDLNQVI ALAGSSPAYF
FLMMEAMIDS AKQDGVDEQT AREMVQQAAL GAAAMVKQNP QLSPAQLREN VTSKGGTTAQ
ALAAFERAGL REIVRTAMHD CMDRAQEMAK QF
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