| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1123 |
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| Symbol | |
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| ID | 4921084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1298053 |
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| End bp | 1299159 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640162658 |
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| Product | A/G-specific adenine glycosylase |
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| Protein accession | YP_001093253 |
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| Protein GI | 127512056 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1194] A/G-specific DNA glycosylase |
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| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000383287 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTTT GGTTGAGAAA AACCTTGCCC CTCTATAGAC TGAGCGCCAT GAAAACAGAG
CAATTTCACC AGCGCATCGT CACCTGGTAC GACAAACACG GACGCAAGCA TCTTCCCTGG
CAACAAGATA AGACCCCTTA TAAGGTATGG GTGTCCGAGA TCATGTTGCA ACAGACTCAG
GTTGCCACAG TTATCCCCTA CTTCGAAGCC TTTATGGCGC GCTTCCCCAC TATCTTGGAC
TTGGCAAATG CCGATCAGGA TGAGGTGCTG CACCACTGGA CCGGCCTAGG CTATTACGCC
AGGGCGCGTA ACCTACATAA GAGTGCCCAG CTGATCGCCA GCGACTATGA TGGTGTCTTC
CCAACCCAAT TCGAGCAGGT ACTCGCCCTA CCGGGTATTG GCCGCTCGAC CGCTGGGGCG
GTACTCTCAC TCTCTCTTGG ACAACATCAC CCCATATTAG ATGGCAACGT CAAGCGAGTG
CTCGCAAGAC ATGGCGCCAT AGCTGGCTGG CCCGGCAAAC GCGAGGTGGA GCAGCAGCTA
TGGCAGCTCA CCAACAGCCT GACCCCTAAG ACAGGCGTAA CCCAATATAA TCAGGCGATG
ATGGATATTG GCGCCAGTAT CTGCACCCGC TCTAAGCCCA GGTGCGAGCT CTGCCCCGTC
GCCATCGACT GTAAGGCGCA GCTGATGGGC CGCCAGACTG AGTTTCCCGG CAAGAAACCG
AAGAAGACGA TTCCGGAAAA GCTCGGCTAT ATGCTAGTGA TTAAAGATGA CGATAGGGTG
CTGATGAGCA AACGCCCACC TGCGGGGATC TGGGGCGGGC TCTGGTGCTT CCCACAGTTT
GACAGCCAGG AGGCGCTCGA GGAGTTTGCC AAAACAAACG GCCTAACTCT TATTAGTGAG
GAGCCCATAG ACAGTTTTCG TCACACCTTC AGCCATTTCC ATCTGGATAT CAGCGCCTTT
GTGGCACACC AAACCACAAG CGCACATGAG ATCATGGAAG AGAGCGGCTC TCTCTGGTAT
AACATAGCCA AGCCACCCAA GGTTGGTCTG GCCGCCGCCA CAGAGCGGAT CCTCGCCAGC
TTAGGTTCAG TATCAAATAA GGAGTAA
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| Protein sequence | MPFWLRKTLP LYRLSAMKTE QFHQRIVTWY DKHGRKHLPW QQDKTPYKVW VSEIMLQQTQ
VATVIPYFEA FMARFPTILD LANADQDEVL HHWTGLGYYA RARNLHKSAQ LIASDYDGVF
PTQFEQVLAL PGIGRSTAGA VLSLSLGQHH PILDGNVKRV LARHGAIAGW PGKREVEQQL
WQLTNSLTPK TGVTQYNQAM MDIGASICTR SKPRCELCPV AIDCKAQLMG RQTEFPGKKP
KKTIPEKLGY MLVIKDDDRV LMSKRPPAGI WGGLWCFPQF DSQEALEEFA KTNGLTLISE
EPIDSFRHTF SHFHLDISAF VAHQTTSAHE IMEESGSLWY NIAKPPKVGL AAATERILAS
LGSVSNKE
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